Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KDELR3O43731 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.52■□□□□ 0.56
KDELR3O43731 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KDELR3O43731 BX276092.5-203ENST00000456199 560 ntBASIC18.52■□□□□ 0.56
KDELR3O43731 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KDELR3O43731 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.52■□□□□ 0.56
KDELR3O43731 AL121672.3-201ENST00000608644 468 ntBASIC18.52■□□□□ 0.56
KDELR3O43731 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.52■□□□□ 0.56
KDELR3O43731 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KDELR3O43731 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
KDELR3O43731 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
KDELR3O43731 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KDELR3O43731 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KDELR3O43731 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.52■□□□□ 0.55
KDELR3O43731 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
KDELR3O43731 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.52■□□□□ 0.55
KDELR3O43731 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.55
KDELR3O43731 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
KDELR3O43731 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
KDELR3O43731 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
KDELR3O43731 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.51■□□□□ 0.55
KDELR3O43731 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
KDELR3O43731 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
KDELR3O43731 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.51■□□□□ 0.55
KDELR3O43731 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KDELR3O43731 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.51■□□□□ 0.55
KDELR3O43731 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KDELR3O43731 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KDELR3O43731 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KDELR3O43731 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KDELR3O43731 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KDELR3O43731 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.51■□□□□ 0.55
KDELR3O43731 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.51■□□□□ 0.55
KDELR3O43731 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.51■□□□□ 0.55
KDELR3O43731 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
KDELR3O43731 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.51■□□□□ 0.55
KDELR3O43731 AC016734.2-201ENST00000624325 1377 ntBASIC18.51■□□□□ 0.55
KDELR3O43731 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KDELR3O43731 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KDELR3O43731 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KDELR3O43731 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.51■□□□□ 0.55
KDELR3O43731 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
KDELR3O43731 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
KDELR3O43731 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.5■□□□□ 0.55
KDELR3O43731 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.5■□□□□ 0.55
KDELR3O43731 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KDELR3O43731 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
KDELR3O43731 LINC00167-201ENST00000530583 1419 ntBASIC18.5■□□□□ 0.55
KDELR3O43731 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
KDELR3O43731 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
KDELR3O43731 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KDELR3O43731 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KDELR3O43731 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
KDELR3O43731 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KDELR3O43731 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KDELR3O43731 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KDELR3O43731 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KDELR3O43731 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.5■□□□□ 0.55
KDELR3O43731 UPK3BP1-201ENST00000428678 509 ntBASIC18.5■□□□□ 0.55
KDELR3O43731 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.5■□□□□ 0.55
KDELR3O43731 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.5■□□□□ 0.55
KDELR3O43731 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.5■□□□□ 0.55
KDELR3O43731 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.5■□□□□ 0.55
KDELR3O43731 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.5■□□□□ 0.55
KDELR3O43731 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KDELR3O43731 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KDELR3O43731 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
KDELR3O43731 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.5■□□□□ 0.55
KDELR3O43731 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KDELR3O43731 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
KDELR3O43731 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.5■□□□□ 0.55
KDELR3O43731 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KDELR3O43731 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KDELR3O43731 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
KDELR3O43731 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
KDELR3O43731 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KDELR3O43731 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KDELR3O43731 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
KDELR3O43731 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KDELR3O43731 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KDELR3O43731 LINC00602-201ENST00000629776 2065 ntBASIC18.5■□□□□ 0.55
KDELR3O43731 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.49■□□□□ 0.55
KDELR3O43731 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
KDELR3O43731 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
KDELR3O43731 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
KDELR3O43731 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KDELR3O43731 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.49■□□□□ 0.55
KDELR3O43731 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
KDELR3O43731 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
KDELR3O43731 AC093010.1-201ENST00000473625 1624 ntBASIC18.49■□□□□ 0.55
KDELR3O43731 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KDELR3O43731 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
KDELR3O43731 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.49■□□□□ 0.55
KDELR3O43731 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
KDELR3O43731 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.49■□□□□ 0.55
KDELR3O43731 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KDELR3O43731 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KDELR3O43731 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KDELR3O43731 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KDELR3O43731 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms