Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CLOCKO15516 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.39■□□□□ 0.38
CLOCKO15516 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
CLOCKO15516 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.39■□□□□ 0.38
CLOCKO15516 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CLOCKO15516 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CLOCKO15516 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CLOCKO15516 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CLOCKO15516 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.39■□□□□ 0.37
CLOCKO15516 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.39■□□□□ 0.37
CLOCKO15516 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLOCKO15516 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLOCKO15516 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLOCKO15516 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLOCKO15516 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLOCKO15516 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CLOCKO15516 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLOCKO15516 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLOCKO15516 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.39■□□□□ 0.37
CLOCKO15516 KRASP1-201ENST00000407852 552 ntBASIC17.39■□□□□ 0.37
CLOCKO15516 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.39■□□□□ 0.37
CLOCKO15516 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.39■□□□□ 0.37
CLOCKO15516 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.39■□□□□ 0.37
CLOCKO15516 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.39■□□□□ 0.37
CLOCKO15516 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.39■□□□□ 0.37
CLOCKO15516 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.39■□□□□ 0.37
CLOCKO15516 PRKY-204ENST00000533551 1019 ntBASIC17.39■□□□□ 0.37
CLOCKO15516 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.39■□□□□ 0.37
CLOCKO15516 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.39■□□□□ 0.37
CLOCKO15516 AL160286.2-201ENST00000567150 934 ntBASIC17.39■□□□□ 0.37
CLOCKO15516 AC011270.2-201ENST00000624293 2550 ntBASIC17.39■□□□□ 0.37
CLOCKO15516 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CLOCKO15516 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.39■□□□□ 0.37
CLOCKO15516 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLOCKO15516 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLOCKO15516 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLOCKO15516 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLOCKO15516 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.39■□□□□ 0.37
CLOCKO15516 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLOCKO15516 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLOCKO15516 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CLOCKO15516 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLOCKO15516 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLOCKO15516 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CLOCKO15516 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLOCKO15516 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLOCKO15516 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLOCKO15516 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
CLOCKO15516 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLOCKO15516 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CLOCKO15516 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLOCKO15516 REXO1L9P-201ENST00000604264 2108 ntBASIC17.38■□□□□ 0.37
CLOCKO15516 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLOCKO15516 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLOCKO15516 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLOCKO15516 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLOCKO15516 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLOCKO15516 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLOCKO15516 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLOCKO15516 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.38■□□□□ 0.37
CLOCKO15516 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.38■□□□□ 0.37
CLOCKO15516 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.38■□□□□ 0.37
CLOCKO15516 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.38■□□□□ 0.37
CLOCKO15516 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CLOCKO15516 Z99916.2-201ENST00000604037 246 ntBASIC17.38■□□□□ 0.37
CLOCKO15516 AC124016.1-201ENST00000609552 612 ntBASIC17.38■□□□□ 0.37
CLOCKO15516 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLOCKO15516 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLOCKO15516 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CLOCKO15516 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.38■□□□□ 0.37
CLOCKO15516 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLOCKO15516 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLOCKO15516 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLOCKO15516 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
CLOCKO15516 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLOCKO15516 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLOCKO15516 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.38■□□□□ 0.37
CLOCKO15516 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLOCKO15516 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLOCKO15516 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.37■□□□□ 0.37
CLOCKO15516 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLOCKO15516 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CLOCKO15516 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CLOCKO15516 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLOCKO15516 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.37■□□□□ 0.37
CLOCKO15516 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLOCKO15516 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLOCKO15516 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
CLOCKO15516 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLOCKO15516 SNORA78-201ENST00000459373 127 ntBASIC17.37■□□□□ 0.37
CLOCKO15516 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.37■□□□□ 0.37
CLOCKO15516 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.37■□□□□ 0.37
CLOCKO15516 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLOCKO15516 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.37■□□□□ 0.37
CLOCKO15516 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.37■□□□□ 0.37
CLOCKO15516 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CLOCKO15516 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLOCKO15516 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CLOCKO15516 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLOCKO15516 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms