Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.9■□□□□ 0.46
TAF4O00268 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.9■□□□□ 0.46
TAF4O00268 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.9■□□□□ 0.46
TAF4O00268 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.9■□□□□ 0.46
TAF4O00268 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
TAF4O00268 AC106730.1-201ENST00000566722 1090 ntBASIC17.9■□□□□ 0.46
TAF4O00268 AC027796.2-201ENST00000575326 344 ntBASIC17.9■□□□□ 0.46
TAF4O00268 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TAF4O00268 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TAF4O00268 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TAF4O00268 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TAF4O00268 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.9■□□□□ 0.46
TAF4O00268 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TAF4O00268 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.9■□□□□ 0.46
TAF4O00268 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
TAF4O00268 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TAF4O00268 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
TAF4O00268 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
TAF4O00268 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TAF4O00268 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TAF4O00268 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.46
TAF4O00268 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.89■□□□□ 0.45
TAF4O00268 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TAF4O00268 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TAF4O00268 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.89■□□□□ 0.45
TAF4O00268 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.89■□□□□ 0.45
TAF4O00268 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TAF4O00268 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.89■□□□□ 0.45
TAF4O00268 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TAF4O00268 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TAF4O00268 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TAF4O00268 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TAF4O00268 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TAF4O00268 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TAF4O00268 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
TAF4O00268 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.89■□□□□ 0.45
TAF4O00268 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TAF4O00268 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TAF4O00268 HLA-F-220ENST00000434407 884 ntBASIC17.89■□□□□ 0.45
TAF4O00268 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.89■□□□□ 0.45
TAF4O00268 AC104819.1-201ENST00000504587 486 ntBASIC17.89■□□□□ 0.45
TAF4O00268 RNF126P1-202ENST00000569893 925 ntBASIC17.89■□□□□ 0.45
TAF4O00268 AC024243.1-201ENST00000609234 778 ntBASIC17.89■□□□□ 0.45
TAF4O00268 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.89■□□□□ 0.45
TAF4O00268 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.89■□□□□ 0.45
TAF4O00268 AC055717.3-201ENST00000622967 595 ntBASIC17.89■□□□□ 0.45
TAF4O00268 TP73-AS1-207ENST00000624167 988 ntBASIC17.89■□□□□ 0.45
TAF4O00268 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.89■□□□□ 0.45
TAF4O00268 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TAF4O00268 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TAF4O00268 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TAF4O00268 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.89■□□□□ 0.45
TAF4O00268 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.89■□□□□ 0.45
TAF4O00268 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TAF4O00268 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.89■□□□□ 0.45
TAF4O00268 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TAF4O00268 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TAF4O00268 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TAF4O00268 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TAF4O00268 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TAF4O00268 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TAF4O00268 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TAF4O00268 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TAF4O00268 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TAF4O00268 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TAF4O00268 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TAF4O00268 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TAF4O00268 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TAF4O00268 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TAF4O00268 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.88■□□□□ 0.45
TAF4O00268 MIR662-201ENST00000384847 95 ntBASIC17.88■□□□□ 0.45
TAF4O00268 MIR564-202ENST00000385049 94 ntBASIC17.88■□□□□ 0.45
TAF4O00268 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.88■□□□□ 0.45
TAF4O00268 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.88■□□□□ 0.45
TAF4O00268 AF238378.1-201ENST00000526806 358 ntBASIC17.88■□□□□ 0.45
TAF4O00268 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TAF4O00268 AC064862.7-201ENST00000604520 867 ntBASIC17.88■□□□□ 0.45
TAF4O00268 AL691403.2-201ENST00000618460 490 ntBASIC17.88■□□□□ 0.45
TAF4O00268 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.88■□□□□ 0.45
TAF4O00268 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.88■□□□□ 0.45
TAF4O00268 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.88■□□□□ 0.45
TAF4O00268 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TAF4O00268 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TAF4O00268 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TAF4O00268 KRT8P11-201ENST00000409686 1436 ntBASIC17.88■□□□□ 0.45
TAF4O00268 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.88■□□□□ 0.45
TAF4O00268 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TAF4O00268 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.88■□□□□ 0.45
TAF4O00268 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
TAF4O00268 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TAF4O00268 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TAF4O00268 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TAF4O00268 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TAF4O00268 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
TAF4O00268 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TAF4O00268 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TAF4O00268 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TAF4O00268 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TAF4O00268 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.87■□□□□ 0.45
TAF4O00268 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms