Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TLR4O00206 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TLR4O00206 MTMR9LP-203ENST00000426597 1545 ntBASIC18.11■□□□□ 0.49
TLR4O00206 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TLR4O00206 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TLR4O00206 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
TLR4O00206 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TLR4O00206 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TLR4O00206 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.11■□□□□ 0.49
TLR4O00206 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.1■□□□□ 0.49
TLR4O00206 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TLR4O00206 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.1■□□□□ 0.49
TLR4O00206 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.1■□□□□ 0.49
TLR4O00206 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TLR4O00206 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TLR4O00206 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
TLR4O00206 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TLR4O00206 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TLR4O00206 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TLR4O00206 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TLR4O00206 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
TLR4O00206 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TLR4O00206 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.1■□□□□ 0.49
TLR4O00206 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.1■□□□□ 0.49
TLR4O00206 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.1■□□□□ 0.49
TLR4O00206 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TLR4O00206 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.1■□□□□ 0.49
TLR4O00206 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.1■□□□□ 0.49
TLR4O00206 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.1■□□□□ 0.49
TLR4O00206 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TLR4O00206 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.1■□□□□ 0.49
TLR4O00206 AC011840.4-201ENST00000578471 627 ntBASIC18.1■□□□□ 0.49
TLR4O00206 AL353801.3-201ENST00000609898 542 ntBASIC18.1■□□□□ 0.49
TLR4O00206 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.1■□□□□ 0.49
TLR4O00206 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TLR4O00206 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TLR4O00206 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TLR4O00206 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TLR4O00206 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.1■□□□□ 0.49
TLR4O00206 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
TLR4O00206 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TLR4O00206 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TLR4O00206 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TLR4O00206 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TLR4O00206 NSUN5P1-202ENST00000421140 1535 ntBASIC18.09■□□□□ 0.49
TLR4O00206 NSUN5P2-203ENST00000457352 1529 ntBASIC18.09■□□□□ 0.49
TLR4O00206 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TLR4O00206 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.09■□□□□ 0.49
TLR4O00206 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TLR4O00206 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TLR4O00206 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.09■□□□□ 0.49
TLR4O00206 AC093503.3-201ENST00000624917 2352 ntBASIC18.09■□□□□ 0.49
TLR4O00206 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TLR4O00206 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TLR4O00206 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.09■□□□□ 0.49
TLR4O00206 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.09■□□□□ 0.49
TLR4O00206 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.09■□□□□ 0.49
TLR4O00206 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.09■□□□□ 0.49
TLR4O00206 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.09■□□□□ 0.49
TLR4O00206 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.09■□□□□ 0.49
TLR4O00206 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TLR4O00206 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.09■□□□□ 0.49
TLR4O00206 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.09■□□□□ 0.49
TLR4O00206 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
TLR4O00206 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TLR4O00206 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
TLR4O00206 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TLR4O00206 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
TLR4O00206 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TLR4O00206 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TLR4O00206 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TLR4O00206 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TLR4O00206 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.09■□□□□ 0.49
TLR4O00206 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TLR4O00206 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.09■□□□□ 0.49
TLR4O00206 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TLR4O00206 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.08■□□□□ 0.49
TLR4O00206 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TLR4O00206 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TLR4O00206 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TLR4O00206 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TLR4O00206 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TLR4O00206 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TLR4O00206 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TLR4O00206 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TLR4O00206 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
TLR4O00206 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TLR4O00206 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TLR4O00206 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TLR4O00206 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TLR4O00206 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.08■□□□□ 0.48
TLR4O00206 KRT16P4-201ENST00000453883 522 ntBASIC18.08■□□□□ 0.48
TLR4O00206 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.08■□□□□ 0.48
TLR4O00206 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.08■□□□□ 0.48
TLR4O00206 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.08■□□□□ 0.48
TLR4O00206 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
TLR4O00206 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.08■□□□□ 0.48
TLR4O00206 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.08■□□□□ 0.48
TLR4O00206 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TLR4O00206 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms