Protein–RNA interactions for Protein: A6NNY8

USP27X, Ubiquitin carboxyl-terminal hydrolase 27, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP27XA6NNY8 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.74■□□□□ 0.75
USP27XA6NNY8 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP27XA6NNY8 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP27XA6NNY8 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP27XA6NNY8 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.74■□□□□ 0.75
USP27XA6NNY8 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
USP27XA6NNY8 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.74■□□□□ 0.75
USP27XA6NNY8 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP27XA6NNY8 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP27XA6NNY8 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP27XA6NNY8 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP27XA6NNY8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP27XA6NNY8 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
USP27XA6NNY8 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.74■□□□□ 0.75
USP27XA6NNY8 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.74■□□□□ 0.75
USP27XA6NNY8 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.74■□□□□ 0.75
USP27XA6NNY8 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.74■□□□□ 0.75
USP27XA6NNY8 AC008687.6-201ENST00000596318 630 ntBASIC19.74■□□□□ 0.75
USP27XA6NNY8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.74■□□□□ 0.75
USP27XA6NNY8 AC092437.1-201ENST00000624794 1048 ntBASIC19.74■□□□□ 0.75
USP27XA6NNY8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.74■□□□□ 0.75
USP27XA6NNY8 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.74■□□□□ 0.75
USP27XA6NNY8 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP27XA6NNY8 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP27XA6NNY8 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
USP27XA6NNY8 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP27XA6NNY8 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP27XA6NNY8 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP27XA6NNY8 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP27XA6NNY8 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.73■□□□□ 0.75
USP27XA6NNY8 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.73■□□□□ 0.75
USP27XA6NNY8 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
USP27XA6NNY8 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.73■□□□□ 0.75
USP27XA6NNY8 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP27XA6NNY8 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.73■□□□□ 0.75
USP27XA6NNY8 AC090192.1-201ENST00000517740 490 ntBASIC19.73■□□□□ 0.75
USP27XA6NNY8 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.73■□□□□ 0.75
USP27XA6NNY8 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.73■□□□□ 0.75
USP27XA6NNY8 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP27XA6NNY8 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
USP27XA6NNY8 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP27XA6NNY8 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP27XA6NNY8 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP27XA6NNY8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
USP27XA6NNY8 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.73■□□□□ 0.75
USP27XA6NNY8 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
USP27XA6NNY8 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP27XA6NNY8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP27XA6NNY8 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP27XA6NNY8 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP27XA6NNY8 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.72■□□□□ 0.75
USP27XA6NNY8 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP27XA6NNY8 AC090340.1-201ENST00000620778 4980 ntBASIC19.72■□□□□ 0.75
USP27XA6NNY8 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP27XA6NNY8 MIR663A-201ENST00000385250 93 ntBASIC19.72■□□□□ 0.75
USP27XA6NNY8 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
USP27XA6NNY8 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.72■□□□□ 0.75
USP27XA6NNY8 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.72■□□□□ 0.75
USP27XA6NNY8 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.72■□□□□ 0.75
USP27XA6NNY8 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.72■□□□□ 0.75
USP27XA6NNY8 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.72■□□□□ 0.75
USP27XA6NNY8 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.72■□□□□ 0.75
USP27XA6NNY8 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
USP27XA6NNY8 AC060766.5-201ENST00000590539 871 ntBASIC19.72■□□□□ 0.75
USP27XA6NNY8 MYC-209ENST00000641252 345 ntBASIC19.72■□□□□ 0.75
USP27XA6NNY8 AC106886.4-201ENST00000623557 2502 ntBASIC19.72■□□□□ 0.75
USP27XA6NNY8 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP27XA6NNY8 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.72■□□□□ 0.75
USP27XA6NNY8 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.72■□□□□ 0.75
USP27XA6NNY8 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.72■□□□□ 0.75
USP27XA6NNY8 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.72■□□□□ 0.75
USP27XA6NNY8 AGGF1P2-201ENST00000426656 2106 ntBASIC19.72■□□□□ 0.75
USP27XA6NNY8 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
USP27XA6NNY8 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.71■□□□□ 0.75
USP27XA6NNY8 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.71■□□□□ 0.75
USP27XA6NNY8 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.71■□□□□ 0.75
USP27XA6NNY8 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP27XA6NNY8 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
USP27XA6NNY8 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP27XA6NNY8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP27XA6NNY8 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP27XA6NNY8 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP27XA6NNY8 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP27XA6NNY8 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.71■□□□□ 0.75
USP27XA6NNY8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP27XA6NNY8 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.71■□□□□ 0.75
USP27XA6NNY8 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.71■□□□□ 0.75
USP27XA6NNY8 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.71■□□□□ 0.75
USP27XA6NNY8 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.71■□□□□ 0.75
USP27XA6NNY8 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.71■□□□□ 0.75
USP27XA6NNY8 AC073111.5-205ENST00000641717 521 ntBASIC19.71■□□□□ 0.75
USP27XA6NNY8 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.71■□□□□ 0.75
USP27XA6NNY8 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP27XA6NNY8 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
USP27XA6NNY8 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP27XA6NNY8 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP27XA6NNY8 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP27XA6NNY8 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP27XA6NNY8 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP27XA6NNY8 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms