Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RCCD1A6NED2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RCCD1A6NED2 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.45■□□□□ 0.7
RCCD1A6NED2 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.45■□□□□ 0.7
RCCD1A6NED2 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RCCD1A6NED2 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.45■□□□□ 0.7
RCCD1A6NED2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
RCCD1A6NED2 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RCCD1A6NED2 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RCCD1A6NED2 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RCCD1A6NED2 MIR149-201ENST00000384879 89 ntBASIC19.45■□□□□ 0.7
RCCD1A6NED2 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RCCD1A6NED2 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RCCD1A6NED2 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.45■□□□□ 0.7
RCCD1A6NED2 AC116562.2-201ENST00000507042 360 ntBASIC19.45■□□□□ 0.7
RCCD1A6NED2 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
RCCD1A6NED2 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.45■□□□□ 0.7
RCCD1A6NED2 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.45■□□□□ 0.7
RCCD1A6NED2 CD177P1-201ENST00000606252 935 ntBASIC19.45■□□□□ 0.7
RCCD1A6NED2 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.45■□□□□ 0.7
RCCD1A6NED2 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.45■□□□□ 0.7
RCCD1A6NED2 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.45■□□□□ 0.7
RCCD1A6NED2 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RCCD1A6NED2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RCCD1A6NED2 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RCCD1A6NED2 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.45■□□□□ 0.7
RCCD1A6NED2 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RCCD1A6NED2 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RCCD1A6NED2 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.45■□□□□ 0.7
RCCD1A6NED2 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RCCD1A6NED2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RCCD1A6NED2 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.44■□□□□ 0.7
RCCD1A6NED2 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RCCD1A6NED2 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RCCD1A6NED2 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RCCD1A6NED2 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.44■□□□□ 0.7
RCCD1A6NED2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RCCD1A6NED2 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RCCD1A6NED2 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
RCCD1A6NED2 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RCCD1A6NED2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RCCD1A6NED2 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.44■□□□□ 0.7
RCCD1A6NED2 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RCCD1A6NED2 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.44■□□□□ 0.7
RCCD1A6NED2 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RCCD1A6NED2 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RCCD1A6NED2 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.44■□□□□ 0.7
RCCD1A6NED2 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.44■□□□□ 0.7
RCCD1A6NED2 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.44■□□□□ 0.7
RCCD1A6NED2 AL359736.2-201ENST00000621992 437 ntBASIC19.44■□□□□ 0.7
RCCD1A6NED2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RCCD1A6NED2 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RCCD1A6NED2 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.44■□□□□ 0.7
RCCD1A6NED2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RCCD1A6NED2 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RCCD1A6NED2 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RCCD1A6NED2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RCCD1A6NED2 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RCCD1A6NED2 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RCCD1A6NED2 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RCCD1A6NED2 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RCCD1A6NED2 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RCCD1A6NED2 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RCCD1A6NED2 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RCCD1A6NED2 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RCCD1A6NED2 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.43■□□□□ 0.7
RCCD1A6NED2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.43■□□□□ 0.7
RCCD1A6NED2 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RCCD1A6NED2 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RCCD1A6NED2 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RCCD1A6NED2 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.43■□□□□ 0.7
RCCD1A6NED2 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RCCD1A6NED2 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.43■□□□□ 0.7
RCCD1A6NED2 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RCCD1A6NED2 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RCCD1A6NED2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RCCD1A6NED2 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RCCD1A6NED2 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
RCCD1A6NED2 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RCCD1A6NED2 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.43■□□□□ 0.7
RCCD1A6NED2 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RCCD1A6NED2 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.43■□□□□ 0.7
RCCD1A6NED2 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RCCD1A6NED2 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
RCCD1A6NED2 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RCCD1A6NED2 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RCCD1A6NED2 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RCCD1A6NED2 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RCCD1A6NED2 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RCCD1A6NED2 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RCCD1A6NED2 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
RCCD1A6NED2 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RCCD1A6NED2 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.42■□□□□ 0.7
RCCD1A6NED2 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RCCD1A6NED2 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RCCD1A6NED2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RCCD1A6NED2 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RCCD1A6NED2 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RCCD1A6NED2 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RCCD1A6NED2 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms