Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC24.7■■□□□ 1.55
SBNO1A3KN83 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.55
SBNO1A3KN83 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC24.7■■□□□ 1.54
SBNO1A3KN83 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
SBNO1A3KN83 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SBNO1A3KN83 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SBNO1A3KN83 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
SBNO1A3KN83 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC24.7■■□□□ 1.54
SBNO1A3KN83 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SBNO1A3KN83 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
SBNO1A3KN83 AP002414.3-201ENST00000589352 1468 ntBASIC24.7■■□□□ 1.54
SBNO1A3KN83 AL049812.1-201ENST00000432563 2267 ntBASIC24.7■■□□□ 1.54
SBNO1A3KN83 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SBNO1A3KN83 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC24.69■■□□□ 1.54
SBNO1A3KN83 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SBNO1A3KN83 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SBNO1A3KN83 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SBNO1A3KN83 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC24.69■■□□□ 1.54
SBNO1A3KN83 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC24.69■■□□□ 1.54
SBNO1A3KN83 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC24.69■■□□□ 1.54
SBNO1A3KN83 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SBNO1A3KN83 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC24.69■■□□□ 1.54
SBNO1A3KN83 RPS29-206ENST00000557111 488 ntTSL 2 BASIC24.69■■□□□ 1.54
SBNO1A3KN83 AC002347.1-201ENST00000569543 541 ntBASIC24.69■■□□□ 1.54
SBNO1A3KN83 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC24.69■■□□□ 1.54
SBNO1A3KN83 MTDHP4-201ENST00000600287 670 ntBASIC24.69■■□□□ 1.54
SBNO1A3KN83 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC24.69■■□□□ 1.54
SBNO1A3KN83 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC24.69■■□□□ 1.54
SBNO1A3KN83 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
SBNO1A3KN83 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
SBNO1A3KN83 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
SBNO1A3KN83 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
SBNO1A3KN83 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SBNO1A3KN83 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC24.69■■□□□ 1.54
SBNO1A3KN83 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC24.69■■□□□ 1.54
SBNO1A3KN83 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
SBNO1A3KN83 SDHAP2-201ENST00000455183 2001 ntBASIC24.68■■□□□ 1.54
SBNO1A3KN83 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC24.68■■□□□ 1.54
SBNO1A3KN83 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SBNO1A3KN83 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
SBNO1A3KN83 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
SBNO1A3KN83 SOD2-201ENST00000337404 991 ntTSL 2 BASIC24.68■■□□□ 1.54
SBNO1A3KN83 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC24.68■■□□□ 1.54
SBNO1A3KN83 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
SBNO1A3KN83 LAGE3P1-201ENST00000425356 484 ntBASIC24.68■■□□□ 1.54
SBNO1A3KN83 RPS8P6-201ENST00000426177 609 ntBASIC24.68■■□□□ 1.54
SBNO1A3KN83 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC24.68■■□□□ 1.54
SBNO1A3KN83 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC24.68■■□□□ 1.54
SBNO1A3KN83 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC24.68■■□□□ 1.54
SBNO1A3KN83 NKAPP1-205ENST00000585790 367 ntBASIC24.68■■□□□ 1.54
SBNO1A3KN83 CYGB-205ENST00000590175 830 ntTSL 3 BASIC24.68■■□□□ 1.54
SBNO1A3KN83 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
SBNO1A3KN83 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC24.68■■□□□ 1.54
SBNO1A3KN83 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
SBNO1A3KN83 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
SBNO1A3KN83 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
SBNO1A3KN83 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SBNO1A3KN83 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC24.68■■□□□ 1.54
SBNO1A3KN83 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC24.68■■□□□ 1.54
SBNO1A3KN83 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC24.68■■□□□ 1.54
SBNO1A3KN83 CRCP-205ENST00000431089 942 ntTSL 2 BASIC24.67■■□□□ 1.54
SBNO1A3KN83 AC009947.1-201ENST00000444350 727 ntBASIC24.67■■□□□ 1.54
SBNO1A3KN83 AP006288.1-201ENST00000446065 395 ntBASIC24.67■■□□□ 1.54
SBNO1A3KN83 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC24.67■■□□□ 1.54
SBNO1A3KN83 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
SBNO1A3KN83 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC24.67■■□□□ 1.54
SBNO1A3KN83 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SBNO1A3KN83 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC24.67■■□□□ 1.54
SBNO1A3KN83 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SBNO1A3KN83 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
SBNO1A3KN83 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC24.67■■□□□ 1.54
SBNO1A3KN83 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC24.67■■□□□ 1.54
SBNO1A3KN83 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SBNO1A3KN83 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SBNO1A3KN83 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC24.67■■□□□ 1.54
SBNO1A3KN83 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC24.67■■□□□ 1.54
SBNO1A3KN83 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC24.67■■□□□ 1.54
SBNO1A3KN83 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
SBNO1A3KN83 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
SBNO1A3KN83 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SBNO1A3KN83 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SBNO1A3KN83 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC24.67■■□□□ 1.54
SBNO1A3KN83 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
SBNO1A3KN83 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
SBNO1A3KN83 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC24.66■■□□□ 1.54
SBNO1A3KN83 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SBNO1A3KN83 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SBNO1A3KN83 DNAJB3-202ENST00000449667 1266 ntBASIC24.66■■□□□ 1.54
SBNO1A3KN83 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC24.66■■□□□ 1.54
SBNO1A3KN83 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC24.66■■□□□ 1.54
SBNO1A3KN83 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
SBNO1A3KN83 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC24.66■■□□□ 1.54
SBNO1A3KN83 RNF151-202ENST00000569210 853 ntTSL 2 BASIC24.66■■□□□ 1.54
SBNO1A3KN83 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SBNO1A3KN83 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SBNO1A3KN83 AC073130.3-201ENST00000624389 2278 ntBASIC24.65■■□□□ 1.54
SBNO1A3KN83 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SBNO1A3KN83 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SBNO1A3KN83 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
SBNO1A3KN83 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms