Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV3S1A0A5B6 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.13■□□□□ 0.33
TCRBV3S1A0A5B6 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV3S1A0A5B6 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TCRBV3S1A0A5B6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV3S1A0A5B6 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV3S1A0A5B6 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
TCRBV3S1A0A5B6 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV3S1A0A5B6 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.13■□□□□ 0.33
TCRBV3S1A0A5B6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
TCRBV3S1A0A5B6 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TCRBV3S1A0A5B6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.13■□□□□ 0.33
TCRBV3S1A0A5B6 AC080038.1-201ENST00000611274 1154 ntBASIC17.13■□□□□ 0.33
TCRBV3S1A0A5B6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.13■□□□□ 0.33
TCRBV3S1A0A5B6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TCRBV3S1A0A5B6 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.13■□□□□ 0.33
TCRBV3S1A0A5B6 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV3S1A0A5B6 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV3S1A0A5B6 AC133963.1-201ENST00000504166 1679 ntBASIC17.13■□□□□ 0.33
TCRBV3S1A0A5B6 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV3S1A0A5B6 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV3S1A0A5B6 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.13■□□□□ 0.33
TCRBV3S1A0A5B6 SDHAP2-201ENST00000455183 2001 ntBASIC17.13■□□□□ 0.33
TCRBV3S1A0A5B6 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV3S1A0A5B6 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV3S1A0A5B6 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TCRBV3S1A0A5B6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.13■□□□□ 0.33
TCRBV3S1A0A5B6 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV3S1A0A5B6 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV3S1A0A5B6 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV3S1A0A5B6 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV3S1A0A5B6 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.12■□□□□ 0.33
TCRBV3S1A0A5B6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.12■□□□□ 0.33
TCRBV3S1A0A5B6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
TCRBV3S1A0A5B6 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV3S1A0A5B6 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.12■□□□□ 0.33
TCRBV3S1A0A5B6 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.12■□□□□ 0.33
TCRBV3S1A0A5B6 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV3S1A0A5B6 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TCRBV3S1A0A5B6 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV3S1A0A5B6 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV3S1A0A5B6 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TCRBV3S1A0A5B6 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.12■□□□□ 0.33
TCRBV3S1A0A5B6 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.12■□□□□ 0.33
TCRBV3S1A0A5B6 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV3S1A0A5B6 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV3S1A0A5B6 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV3S1A0A5B6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TCRBV3S1A0A5B6 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV3S1A0A5B6 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.12■□□□□ 0.33
TCRBV3S1A0A5B6 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV3S1A0A5B6 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TCRBV3S1A0A5B6 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TCRBV3S1A0A5B6 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.12■□□□□ 0.33
TCRBV3S1A0A5B6 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV3S1A0A5B6 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TCRBV3S1A0A5B6 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 AL445675.2-201ENST00000620291 557 ntBASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.11■□□□□ 0.33
TCRBV3S1A0A5B6 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV3S1A0A5B6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TCRBV3S1A0A5B6 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TCRBV3S1A0A5B6 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms