Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRDV1A0A1B0GX56 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRDV1A0A1B0GX56 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.1■□□□□ 0.17
TRDV1A0A1B0GX56 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.1■□□□□ 0.17
TRDV1A0A1B0GX56 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.1■□□□□ 0.17
TRDV1A0A1B0GX56 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRDV1A0A1B0GX56 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.1■□□□□ 0.17
TRDV1A0A1B0GX56 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.1■□□□□ 0.17
TRDV1A0A1B0GX56 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRDV1A0A1B0GX56 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRDV1A0A1B0GX56 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRDV1A0A1B0GX56 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.1■□□□□ 0.17
TRDV1A0A1B0GX56 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRDV1A0A1B0GX56 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRDV1A0A1B0GX56 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.1■□□□□ 0.17
TRDV1A0A1B0GX56 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRDV1A0A1B0GX56 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRDV1A0A1B0GX56 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRDV1A0A1B0GX56 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRDV1A0A1B0GX56 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRDV1A0A1B0GX56 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRDV1A0A1B0GX56 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRDV1A0A1B0GX56 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TRDV1A0A1B0GX56 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRDV1A0A1B0GX56 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRDV1A0A1B0GX56 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRDV1A0A1B0GX56 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.09■□□□□ 0.17
TRDV1A0A1B0GX56 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRDV1A0A1B0GX56 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRDV1A0A1B0GX56 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.09■□□□□ 0.17
TRDV1A0A1B0GX56 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRDV1A0A1B0GX56 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRDV1A0A1B0GX56 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRDV1A0A1B0GX56 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRDV1A0A1B0GX56 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRDV1A0A1B0GX56 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRDV1A0A1B0GX56 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRDV1A0A1B0GX56 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRDV1A0A1B0GX56 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
TRDV1A0A1B0GX56 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TRDV1A0A1B0GX56 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
TRDV1A0A1B0GX56 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.09■□□□□ 0.17
TRDV1A0A1B0GX56 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.09■□□□□ 0.17
TRDV1A0A1B0GX56 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.09■□□□□ 0.17
TRDV1A0A1B0GX56 MYC-209ENST00000641252 345 ntBASIC16.09■□□□□ 0.17
TRDV1A0A1B0GX56 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRDV1A0A1B0GX56 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRDV1A0A1B0GX56 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.09■□□□□ 0.17
TRDV1A0A1B0GX56 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRDV1A0A1B0GX56 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.09■□□□□ 0.17
TRDV1A0A1B0GX56 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRDV1A0A1B0GX56 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRDV1A0A1B0GX56 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRDV1A0A1B0GX56 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRDV1A0A1B0GX56 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRDV1A0A1B0GX56 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.09■□□□□ 0.17
TRDV1A0A1B0GX56 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRDV1A0A1B0GX56 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRDV1A0A1B0GX56 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
TRDV1A0A1B0GX56 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.08■□□□□ 0.17
TRDV1A0A1B0GX56 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRDV1A0A1B0GX56 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRDV1A0A1B0GX56 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRDV1A0A1B0GX56 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.08■□□□□ 0.16
TRDV1A0A1B0GX56 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.08■□□□□ 0.16
TRDV1A0A1B0GX56 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRDV1A0A1B0GX56 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TRDV1A0A1B0GX56 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRDV1A0A1B0GX56 AC097658.1-201ENST00000475555 843 ntBASIC16.08■□□□□ 0.16
TRDV1A0A1B0GX56 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRDV1A0A1B0GX56 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.08■□□□□ 0.16
TRDV1A0A1B0GX56 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRDV1A0A1B0GX56 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.08■□□□□ 0.16
TRDV1A0A1B0GX56 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.08■□□□□ 0.16
TRDV1A0A1B0GX56 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TRDV1A0A1B0GX56 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRDV1A0A1B0GX56 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.08■□□□□ 0.16
TRDV1A0A1B0GX56 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.08■□□□□ 0.16
TRDV1A0A1B0GX56 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRDV1A0A1B0GX56 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRDV1A0A1B0GX56 AC093010.1-201ENST00000473625 1624 ntBASIC16.08■□□□□ 0.16
TRDV1A0A1B0GX56 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRDV1A0A1B0GX56 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.08■□□□□ 0.16
TRDV1A0A1B0GX56 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.08■□□□□ 0.16
TRDV1A0A1B0GX56 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRDV1A0A1B0GX56 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRDV1A0A1B0GX56 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRDV1A0A1B0GX56 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRDV1A0A1B0GX56 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRDV1A0A1B0GX56 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRDV1A0A1B0GX56 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRDV1A0A1B0GX56 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRDV1A0A1B0GX56 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRDV1A0A1B0GX56 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRDV1A0A1B0GX56 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRDV1A0A1B0GX56 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRDV1A0A1B0GX56 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
TRDV1A0A1B0GX56 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRDV1A0A1B0GX56 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRDV1A0A1B0GX56 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms