Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC187A0A096LP49 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC187A0A096LP49 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC187A0A096LP49 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC187A0A096LP49 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CCDC187A0A096LP49 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CCDC187A0A096LP49 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CCDC187A0A096LP49 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC187A0A096LP49 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
CCDC187A0A096LP49 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CCDC187A0A096LP49 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC187A0A096LP49 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC187A0A096LP49 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC187A0A096LP49 MIR1233-2-201ENST00000408138 82 ntBASIC17.29■□□□□ 0.36
CCDC187A0A096LP49 MIR1233-1-201ENST00000408722 82 ntBASIC17.29■□□□□ 0.36
CCDC187A0A096LP49 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC187A0A096LP49 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.29■□□□□ 0.36
CCDC187A0A096LP49 AL049840.3-201ENST00000602669 611 ntBASIC17.29■□□□□ 0.36
CCDC187A0A096LP49 AC009154.2-201ENST00000621177 724 ntBASIC17.29■□□□□ 0.36
CCDC187A0A096LP49 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC187A0A096LP49 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC187A0A096LP49 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC187A0A096LP49 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC187A0A096LP49 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC187A0A096LP49 AC007952.6-201ENST00000573168 2673 ntBASIC17.29■□□□□ 0.36
CCDC187A0A096LP49 AC003957.1-201ENST00000625108 2673 ntBASIC17.29■□□□□ 0.36
CCDC187A0A096LP49 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC187A0A096LP49 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC187A0A096LP49 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC187A0A096LP49 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC187A0A096LP49 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC187A0A096LP49 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC187A0A096LP49 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC187A0A096LP49 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC187A0A096LP49 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC187A0A096LP49 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC187A0A096LP49 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 AC083906.6-201ENST00000641366 219 ntBASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.28■□□□□ 0.36
CCDC187A0A096LP49 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CCDC187A0A096LP49 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC187A0A096LP49 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC187A0A096LP49 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.27■□□□□ 0.36
CCDC187A0A096LP49 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CCDC187A0A096LP49 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.27■□□□□ 0.36
CCDC187A0A096LP49 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.36
CCDC187A0A096LP49 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC187A0A096LP49 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CCDC187A0A096LP49 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.27■□□□□ 0.36
CCDC187A0A096LP49 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.27■□□□□ 0.36
CCDC187A0A096LP49 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.27■□□□□ 0.36
CCDC187A0A096LP49 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
CCDC187A0A096LP49 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC187A0A096LP49 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC187A0A096LP49 AP001269.4-201ENST00000609611 512 ntBASIC17.27■□□□□ 0.36
CCDC187A0A096LP49 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.27■□□□□ 0.36
CCDC187A0A096LP49 AL032819.2-201ENST00000624543 2162 ntBASIC17.27■□□□□ 0.36
CCDC187A0A096LP49 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
CCDC187A0A096LP49 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.27■□□□□ 0.36
CCDC187A0A096LP49 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.27■□□□□ 0.35
CCDC187A0A096LP49 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.27■□□□□ 0.35
CCDC187A0A096LP49 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC187A0A096LP49 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms