Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN6Q9Y6Q1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN6Q9Y6Q1 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.41■□□□□ 0.7
CAPN6Q9Y6Q1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.41■□□□□ 0.7
CAPN6Q9Y6Q1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.41■□□□□ 0.7
CAPN6Q9Y6Q1 AC073195.1-201ENST00000607241 877 ntBASIC19.41■□□□□ 0.7
CAPN6Q9Y6Q1 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN6Q9Y6Q1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN6Q9Y6Q1 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CAPN6Q9Y6Q1 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN6Q9Y6Q1 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN6Q9Y6Q1 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN6Q9Y6Q1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN6Q9Y6Q1 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN6Q9Y6Q1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN6Q9Y6Q1 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN6Q9Y6Q1 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN6Q9Y6Q1 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN6Q9Y6Q1 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN6Q9Y6Q1 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN6Q9Y6Q1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN6Q9Y6Q1 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN6Q9Y6Q1 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN6Q9Y6Q1 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CAPN6Q9Y6Q1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN6Q9Y6Q1 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
CAPN6Q9Y6Q1 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN6Q9Y6Q1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN6Q9Y6Q1 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN6Q9Y6Q1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN6Q9Y6Q1 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN6Q9Y6Q1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.4■□□□□ 0.7
CAPN6Q9Y6Q1 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.4■□□□□ 0.7
CAPN6Q9Y6Q1 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.4■□□□□ 0.7
CAPN6Q9Y6Q1 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.4■□□□□ 0.7
CAPN6Q9Y6Q1 C1QBPP2-201ENST00000528754 825 ntBASIC19.4■□□□□ 0.7
CAPN6Q9Y6Q1 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN6Q9Y6Q1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN6Q9Y6Q1 AC096733.2-201ENST00000609937 1394 ntBASIC19.4■□□□□ 0.7
CAPN6Q9Y6Q1 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.4■□□□□ 0.7
CAPN6Q9Y6Q1 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN6Q9Y6Q1 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN6Q9Y6Q1 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN6Q9Y6Q1 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CAPN6Q9Y6Q1 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
CAPN6Q9Y6Q1 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN6Q9Y6Q1 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CAPN6Q9Y6Q1 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.4■□□□□ 0.7
CAPN6Q9Y6Q1 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.4■□□□□ 0.7
CAPN6Q9Y6Q1 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN6Q9Y6Q1 AC093010.1-201ENST00000473625 1624 ntBASIC19.4■□□□□ 0.7
CAPN6Q9Y6Q1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.39■□□□□ 0.7
CAPN6Q9Y6Q1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.39■□□□□ 0.7
CAPN6Q9Y6Q1 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CAPN6Q9Y6Q1 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.7
CAPN6Q9Y6Q1 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.39■□□□□ 0.7
CAPN6Q9Y6Q1 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CAPN6Q9Y6Q1 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CAPN6Q9Y6Q1 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPN6Q9Y6Q1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPN6Q9Y6Q1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.39■□□□□ 0.69
CAPN6Q9Y6Q1 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.39■□□□□ 0.69
CAPN6Q9Y6Q1 MIR4674-201ENST00000582457 87 ntBASIC19.39■□□□□ 0.69
CAPN6Q9Y6Q1 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.39■□□□□ 0.69
CAPN6Q9Y6Q1 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.39■□□□□ 0.69
CAPN6Q9Y6Q1 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CAPN6Q9Y6Q1 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPN6Q9Y6Q1 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPN6Q9Y6Q1 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPN6Q9Y6Q1 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPN6Q9Y6Q1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPN6Q9Y6Q1 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPN6Q9Y6Q1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPN6Q9Y6Q1 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.39■□□□□ 0.69
CAPN6Q9Y6Q1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPN6Q9Y6Q1 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.39■□□□□ 0.69
CAPN6Q9Y6Q1 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPN6Q9Y6Q1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CAPN6Q9Y6Q1 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CAPN6Q9Y6Q1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CAPN6Q9Y6Q1 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CAPN6Q9Y6Q1 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CAPN6Q9Y6Q1 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.38■□□□□ 0.69
CAPN6Q9Y6Q1 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CAPN6Q9Y6Q1 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CAPN6Q9Y6Q1 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CAPN6Q9Y6Q1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CAPN6Q9Y6Q1 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CAPN6Q9Y6Q1 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CAPN6Q9Y6Q1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.38■□□□□ 0.69
CAPN6Q9Y6Q1 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.38■□□□□ 0.69
CAPN6Q9Y6Q1 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.38■□□□□ 0.69
CAPN6Q9Y6Q1 AC128676.1-201ENST00000454392 318 ntBASIC19.38■□□□□ 0.69
CAPN6Q9Y6Q1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CAPN6Q9Y6Q1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CAPN6Q9Y6Q1 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CAPN6Q9Y6Q1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.38■□□□□ 0.69
CAPN6Q9Y6Q1 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CAPN6Q9Y6Q1 RARRES2P10-201ENST00000564312 460 ntBASIC19.38■□□□□ 0.69
CAPN6Q9Y6Q1 AL163051.1-201ENST00000569214 1512 ntBASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms