Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 MIR1233-2-201ENST00000408138 82 ntBASIC19.99■□□□□ 0.79
SCN10AQ9Y5Y9 MIR1233-1-201ENST00000408722 82 ntBASIC19.99■□□□□ 0.79
SCN10AQ9Y5Y9 AC098831.1-202ENST00000438821 336 ntBASIC19.99■□□□□ 0.79
SCN10AQ9Y5Y9 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.99■□□□□ 0.79
SCN10AQ9Y5Y9 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.99■□□□□ 0.79
SCN10AQ9Y5Y9 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.99■□□□□ 0.79
SCN10AQ9Y5Y9 ANO7L1-203ENST00000602586 1720 ntBASIC19.99■□□□□ 0.79
SCN10AQ9Y5Y9 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCN10AQ9Y5Y9 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.99■□□□□ 0.79
SCN10AQ9Y5Y9 LINC00602-201ENST00000629776 2065 ntBASIC19.99■□□□□ 0.79
SCN10AQ9Y5Y9 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCN10AQ9Y5Y9 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.99■□□□□ 0.79
SCN10AQ9Y5Y9 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.99■□□□□ 0.79
SCN10AQ9Y5Y9 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SCN10AQ9Y5Y9 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SCN10AQ9Y5Y9 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCN10AQ9Y5Y9 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCN10AQ9Y5Y9 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.99■□□□□ 0.79
SCN10AQ9Y5Y9 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SCN10AQ9Y5Y9 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.99■□□□□ 0.79
SCN10AQ9Y5Y9 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.99■□□□□ 0.79
SCN10AQ9Y5Y9 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SCN10AQ9Y5Y9 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.99■□□□□ 0.79
SCN10AQ9Y5Y9 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCN10AQ9Y5Y9 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SCN10AQ9Y5Y9 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCN10AQ9Y5Y9 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.98■□□□□ 0.79
SCN10AQ9Y5Y9 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCN10AQ9Y5Y9 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCN10AQ9Y5Y9 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCN10AQ9Y5Y9 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCN10AQ9Y5Y9 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.98■□□□□ 0.79
SCN10AQ9Y5Y9 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.98■□□□□ 0.79
SCN10AQ9Y5Y9 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.98■□□□□ 0.79
SCN10AQ9Y5Y9 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.98■□□□□ 0.79
SCN10AQ9Y5Y9 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SCN10AQ9Y5Y9 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCN10AQ9Y5Y9 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SCN10AQ9Y5Y9 AL356309.3-201ENST00000624132 1934 ntBASIC19.98■□□□□ 0.79
SCN10AQ9Y5Y9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
SCN10AQ9Y5Y9 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCN10AQ9Y5Y9 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SCN10AQ9Y5Y9 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCN10AQ9Y5Y9 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.97■□□□□ 0.79
SCN10AQ9Y5Y9 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCN10AQ9Y5Y9 AC025062.2-201ENST00000605477 670 ntBASIC19.97■□□□□ 0.79
SCN10AQ9Y5Y9 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCN10AQ9Y5Y9 AC005082.1-201ENST00000413042 2259 ntBASIC19.97■□□□□ 0.79
SCN10AQ9Y5Y9 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.97■□□□□ 0.79
SCN10AQ9Y5Y9 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.97■□□□□ 0.79
SCN10AQ9Y5Y9 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.97■□□□□ 0.79
SCN10AQ9Y5Y9 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SCN10AQ9Y5Y9 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.97■□□□□ 0.79
SCN10AQ9Y5Y9 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCN10AQ9Y5Y9 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SCN10AQ9Y5Y9 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SCN10AQ9Y5Y9 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SCN10AQ9Y5Y9 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
SCN10AQ9Y5Y9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SCN10AQ9Y5Y9 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.97■□□□□ 0.79
SCN10AQ9Y5Y9 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCN10AQ9Y5Y9 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SCN10AQ9Y5Y9 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.96■□□□□ 0.79
SCN10AQ9Y5Y9 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.96■□□□□ 0.79
SCN10AQ9Y5Y9 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.96■□□□□ 0.79
SCN10AQ9Y5Y9 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.96■□□□□ 0.79
SCN10AQ9Y5Y9 AC027601.4-201ENST00000611259 610 ntBASIC19.96■□□□□ 0.79
SCN10AQ9Y5Y9 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.96■□□□□ 0.79
SCN10AQ9Y5Y9 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.96■□□□□ 0.79
SCN10AQ9Y5Y9 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SCN10AQ9Y5Y9 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.96■□□□□ 0.79
SCN10AQ9Y5Y9 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.96■□□□□ 0.79
SCN10AQ9Y5Y9 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.96■□□□□ 0.79
SCN10AQ9Y5Y9 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.96■□□□□ 0.79
SCN10AQ9Y5Y9 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCN10AQ9Y5Y9 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SCN10AQ9Y5Y9 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.95■□□□□ 0.78
SCN10AQ9Y5Y9 RNA5SP415-201ENST00000517246 115 ntBASIC19.95■□□□□ 0.78
SCN10AQ9Y5Y9 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.95■□□□□ 0.78
SCN10AQ9Y5Y9 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.95■□□□□ 0.78
SCN10AQ9Y5Y9 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCN10AQ9Y5Y9 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCN10AQ9Y5Y9 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCN10AQ9Y5Y9 ZNF259P1-201ENST00000407656 1365 ntBASIC19.95■□□□□ 0.78
SCN10AQ9Y5Y9 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCN10AQ9Y5Y9 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SCN10AQ9Y5Y9 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCN10AQ9Y5Y9 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SCN10AQ9Y5Y9 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCN10AQ9Y5Y9 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCN10AQ9Y5Y9 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SCN10AQ9Y5Y9 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCN10AQ9Y5Y9 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCN10AQ9Y5Y9 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCN10AQ9Y5Y9 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SCN10AQ9Y5Y9 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.95■□□□□ 0.78
SCN10AQ9Y5Y9 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCN10AQ9Y5Y9 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SCN10AQ9Y5Y9 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SCN10AQ9Y5Y9 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms