Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SNX9Q9Y5X1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SNX9Q9Y5X1 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX9Q9Y5X1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SNX9Q9Y5X1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX9Q9Y5X1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX9Q9Y5X1 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX9Q9Y5X1 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.57■□□□□ 0.72
SNX9Q9Y5X1 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SNX9Q9Y5X1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX9Q9Y5X1 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX9Q9Y5X1 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.56■□□□□ 0.72
SNX9Q9Y5X1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX9Q9Y5X1 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.56■□□□□ 0.72
SNX9Q9Y5X1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SNX9Q9Y5X1 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SNX9Q9Y5X1 KRT89P-201ENST00000620027 1478 ntBASIC19.56■□□□□ 0.72
SNX9Q9Y5X1 LINC01126-201ENST00000623515 1646 ntBASIC19.56■□□□□ 0.72
SNX9Q9Y5X1 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX9Q9Y5X1 IGHGP-201ENST00000390555 1178 ntBASIC19.56■□□□□ 0.72
SNX9Q9Y5X1 BX276092.5-203ENST00000456199 560 ntBASIC19.56■□□□□ 0.72
SNX9Q9Y5X1 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.56■□□□□ 0.72
SNX9Q9Y5X1 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SNX9Q9Y5X1 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SNX9Q9Y5X1 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.56■□□□□ 0.72
SNX9Q9Y5X1 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.56■□□□□ 0.72
SNX9Q9Y5X1 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.56■□□□□ 0.72
SNX9Q9Y5X1 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.56■□□□□ 0.72
SNX9Q9Y5X1 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.56■□□□□ 0.72
SNX9Q9Y5X1 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.56■□□□□ 0.72
SNX9Q9Y5X1 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SNX9Q9Y5X1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX9Q9Y5X1 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX9Q9Y5X1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX9Q9Y5X1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX9Q9Y5X1 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SNX9Q9Y5X1 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX9Q9Y5X1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
SNX9Q9Y5X1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
SNX9Q9Y5X1 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.56■□□□□ 0.72
SNX9Q9Y5X1 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX9Q9Y5X1 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SNX9Q9Y5X1 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SNX9Q9Y5X1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SNX9Q9Y5X1 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SNX9Q9Y5X1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX9Q9Y5X1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX9Q9Y5X1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX9Q9Y5X1 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SNX9Q9Y5X1 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.55■□□□□ 0.72
SNX9Q9Y5X1 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.55■□□□□ 0.72
SNX9Q9Y5X1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX9Q9Y5X1 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX9Q9Y5X1 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX9Q9Y5X1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.55■□□□□ 0.72
SNX9Q9Y5X1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SNX9Q9Y5X1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX9Q9Y5X1 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX9Q9Y5X1 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX9Q9Y5X1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.55■□□□□ 0.72
SNX9Q9Y5X1 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.55■□□□□ 0.72
SNX9Q9Y5X1 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX9Q9Y5X1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SNX9Q9Y5X1 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.55■□□□□ 0.72
SNX9Q9Y5X1 KRT8P26-201ENST00000534154 1276 ntBASIC19.55■□□□□ 0.72
SNX9Q9Y5X1 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.55■□□□□ 0.72
SNX9Q9Y5X1 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SNX9Q9Y5X1 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.55■□□□□ 0.72
SNX9Q9Y5X1 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.55■□□□□ 0.72
SNX9Q9Y5X1 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.55■□□□□ 0.72
SNX9Q9Y5X1 GPR32P1-201ENST00000601788 811 ntBASIC19.55■□□□□ 0.72
SNX9Q9Y5X1 AL121672.3-201ENST00000608644 468 ntBASIC19.55■□□□□ 0.72
SNX9Q9Y5X1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SNX9Q9Y5X1 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX9Q9Y5X1 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SNX9Q9Y5X1 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX9Q9Y5X1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX9Q9Y5X1 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SNX9Q9Y5X1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SNX9Q9Y5X1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.55■□□□□ 0.72
SNX9Q9Y5X1 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX9Q9Y5X1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX9Q9Y5X1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.54■□□□□ 0.72
SNX9Q9Y5X1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.54■□□□□ 0.72
SNX9Q9Y5X1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX9Q9Y5X1 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX9Q9Y5X1 GMCL1P1-201ENST00000463439 1581 ntBASIC19.54■□□□□ 0.72
SNX9Q9Y5X1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX9Q9Y5X1 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX9Q9Y5X1 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.54■□□□□ 0.72
SNX9Q9Y5X1 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.54■□□□□ 0.72
SNX9Q9Y5X1 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX9Q9Y5X1 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.54■□□□□ 0.72
SNX9Q9Y5X1 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.54■□□□□ 0.72
SNX9Q9Y5X1 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX9Q9Y5X1 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SNX9Q9Y5X1 AL390719.2-201ENST00000606993 987 ntBASIC19.54■□□□□ 0.72
SNX9Q9Y5X1 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX9Q9Y5X1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX9Q9Y5X1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms