Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
RTCBQ9Y3I0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.02■■□□□ 1.28
RTCBQ9Y3I0 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC23.02■■□□□ 1.28
RTCBQ9Y3I0 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTCBQ9Y3I0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
RTCBQ9Y3I0 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
RTCBQ9Y3I0 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTCBQ9Y3I0 PMP22-202ENST00000395936 816 ntTSL 3 BASIC23.02■■□□□ 1.28
RTCBQ9Y3I0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC23.02■■□□□ 1.28
RTCBQ9Y3I0 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC23.02■■□□□ 1.28
RTCBQ9Y3I0 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC23.02■■□□□ 1.28
RTCBQ9Y3I0 NKAPP1-205ENST00000585790 367 ntBASIC23.02■■□□□ 1.28
RTCBQ9Y3I0 MTDHP4-201ENST00000600287 670 ntBASIC23.02■■□□□ 1.28
RTCBQ9Y3I0 AC107918.4-202ENST00000641623 219 ntBASIC23.02■■□□□ 1.28
RTCBQ9Y3I0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
RTCBQ9Y3I0 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTCBQ9Y3I0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTCBQ9Y3I0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RTCBQ9Y3I0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RTCBQ9Y3I0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
RTCBQ9Y3I0 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RTCBQ9Y3I0 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RTCBQ9Y3I0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RTCBQ9Y3I0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RTCBQ9Y3I0 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTCBQ9Y3I0 SOD2-201ENST00000337404 991 ntTSL 2 BASIC23.01■■□□□ 1.27
RTCBQ9Y3I0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTCBQ9Y3I0 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
RTCBQ9Y3I0 RNA5SP416-201ENST00000516838 111 ntBASIC23.01■■□□□ 1.27
RTCBQ9Y3I0 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC23.01■■□□□ 1.27
RTCBQ9Y3I0 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC23.01■■□□□ 1.27
RTCBQ9Y3I0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTCBQ9Y3I0 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.01■■□□□ 1.27
RTCBQ9Y3I0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTCBQ9Y3I0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC23.01■■□□□ 1.27
RTCBQ9Y3I0 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RTCBQ9Y3I0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC23.01■■□□□ 1.27
RTCBQ9Y3I0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
RTCBQ9Y3I0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
RTCBQ9Y3I0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RTCBQ9Y3I0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC23■■□□□ 1.27
RTCBQ9Y3I0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC23■■□□□ 1.27
RTCBQ9Y3I0 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RTCBQ9Y3I0 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC23■■□□□ 1.27
RTCBQ9Y3I0 AP002414.3-201ENST00000589352 1468 ntBASIC23■■□□□ 1.27
RTCBQ9Y3I0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RTCBQ9Y3I0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
RTCBQ9Y3I0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC23■■□□□ 1.27
RTCBQ9Y3I0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC23■■□□□ 1.27
RTCBQ9Y3I0 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC23■■□□□ 1.27
RTCBQ9Y3I0 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC23■■□□□ 1.27
RTCBQ9Y3I0 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC23■■□□□ 1.27
RTCBQ9Y3I0 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC23■■□□□ 1.27
RTCBQ9Y3I0 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC23■■□□□ 1.27
RTCBQ9Y3I0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC23■■□□□ 1.27
RTCBQ9Y3I0 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
RTCBQ9Y3I0 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC23■■□□□ 1.27
RTCBQ9Y3I0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC23■■□□□ 1.27
RTCBQ9Y3I0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC23■■□□□ 1.27
RTCBQ9Y3I0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
RTCBQ9Y3I0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RTCBQ9Y3I0 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC23■■□□□ 1.27
RTCBQ9Y3I0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RTCBQ9Y3I0 AL158211.5-201ENST00000623583 2518 ntBASIC23■■□□□ 1.27
RTCBQ9Y3I0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC23■■□□□ 1.27
RTCBQ9Y3I0 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RTCBQ9Y3I0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RTCBQ9Y3I0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
RTCBQ9Y3I0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RTCBQ9Y3I0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC22.99■■□□□ 1.27
RTCBQ9Y3I0 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
RTCBQ9Y3I0 AL032819.2-201ENST00000624543 2162 ntBASIC22.99■■□□□ 1.27
RTCBQ9Y3I0 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
RTCBQ9Y3I0 MYLKP1-201ENST00000509077 1580 ntBASIC22.99■■□□□ 1.27
RTCBQ9Y3I0 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
RTCBQ9Y3I0 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RTCBQ9Y3I0 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
RTCBQ9Y3I0 CTNS-203ENST00000399306 803 ntTSL 3 BASIC22.99■■□□□ 1.27
RTCBQ9Y3I0 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
RTCBQ9Y3I0 AC004832.2-201ENST00000426397 482 ntBASIC22.99■■□□□ 1.27
RTCBQ9Y3I0 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RTCBQ9Y3I0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
RTCBQ9Y3I0 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC22.99■■□□□ 1.27
RTCBQ9Y3I0 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC22.99■■□□□ 1.27
RTCBQ9Y3I0 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC22.99■■□□□ 1.27
RTCBQ9Y3I0 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC22.99■■□□□ 1.27
RTCBQ9Y3I0 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC22.99■■□□□ 1.27
RTCBQ9Y3I0 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RTCBQ9Y3I0 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC22.99■■□□□ 1.27
RTCBQ9Y3I0 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC22.99■■□□□ 1.27
RTCBQ9Y3I0 AC134684.3-201ENST00000641758 218 ntBASIC22.99■■□□□ 1.27
RTCBQ9Y3I0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC22.99■■□□□ 1.27
RTCBQ9Y3I0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC22.99■■□□□ 1.27
RTCBQ9Y3I0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RTCBQ9Y3I0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RTCBQ9Y3I0 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RTCBQ9Y3I0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RTCBQ9Y3I0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RTCBQ9Y3I0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RTCBQ9Y3I0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms