Protein–RNA interactions for Protein: Q9Y223

GNE, Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase, humanhuman

Known RBP Predictions only

Length 722 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GNEQ9Y223 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.36■□□□□ 0.85
GNEQ9Y223 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
GNEQ9Y223 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GNEQ9Y223 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GNEQ9Y223 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
GNEQ9Y223 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GNEQ9Y223 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.36■□□□□ 0.85
GNEQ9Y223 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
GNEQ9Y223 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
GNEQ9Y223 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
GNEQ9Y223 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.35■□□□□ 0.85
GNEQ9Y223 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.35■□□□□ 0.85
GNEQ9Y223 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GNEQ9Y223 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GNEQ9Y223 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.35■□□□□ 0.85
GNEQ9Y223 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GNEQ9Y223 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
GNEQ9Y223 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.35■□□□□ 0.85
GNEQ9Y223 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.35■□□□□ 0.85
GNEQ9Y223 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.35■□□□□ 0.85
GNEQ9Y223 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.35■□□□□ 0.85
GNEQ9Y223 MTDHP3-201ENST00000594186 672 ntBASIC20.35■□□□□ 0.85
GNEQ9Y223 AC011467.2-201ENST00000598425 242 ntBASIC20.35■□□□□ 0.85
GNEQ9Y223 FAM215A-202ENST00000632077 792 ntBASIC20.35■□□□□ 0.85
GNEQ9Y223 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.35■□□□□ 0.85
GNEQ9Y223 AC125634.1-201ENST00000438758 1403 ntBASIC20.35■□□□□ 0.85
GNEQ9Y223 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GNEQ9Y223 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GNEQ9Y223 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GNEQ9Y223 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GNEQ9Y223 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.34■□□□□ 0.85
GNEQ9Y223 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.34■□□□□ 0.85
GNEQ9Y223 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.34■□□□□ 0.85
GNEQ9Y223 SCARNA2-201ENST00000458748 420 ntBASIC20.34■□□□□ 0.85
GNEQ9Y223 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.34■□□□□ 0.85
GNEQ9Y223 AC093909.1-201ENST00000504731 1122 ntBASIC20.34■□□□□ 0.85
GNEQ9Y223 KRT18P58-201ENST00000527480 1120 ntBASIC20.34■□□□□ 0.85
GNEQ9Y223 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.34■□□□□ 0.85
GNEQ9Y223 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.34■□□□□ 0.85
GNEQ9Y223 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.34■□□□□ 0.85
GNEQ9Y223 AC139530.3-201ENST00000620344 690 ntBASIC20.34■□□□□ 0.85
GNEQ9Y223 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GNEQ9Y223 LINC01126-201ENST00000623515 1646 ntBASIC20.34■□□□□ 0.85
GNEQ9Y223 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.34■□□□□ 0.85
GNEQ9Y223 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GNEQ9Y223 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GNEQ9Y223 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.34■□□□□ 0.85
GNEQ9Y223 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
GNEQ9Y223 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
GNEQ9Y223 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.33■□□□□ 0.85
GNEQ9Y223 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.33■□□□□ 0.85
GNEQ9Y223 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
GNEQ9Y223 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
GNEQ9Y223 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GNEQ9Y223 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.33■□□□□ 0.85
GNEQ9Y223 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.33■□□□□ 0.85
GNEQ9Y223 AC073648.2-201ENST00000510116 352 ntBASIC20.33■□□□□ 0.85
GNEQ9Y223 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GNEQ9Y223 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.33■□□□□ 0.85
GNEQ9Y223 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.33■□□□□ 0.85
GNEQ9Y223 AC139887.3-201ENST00000568585 713 ntBASIC20.33■□□□□ 0.85
GNEQ9Y223 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.33■□□□□ 0.85
GNEQ9Y223 AL499627.1-201ENST00000569373 2188 ntBASIC20.33■□□□□ 0.85
GNEQ9Y223 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.33■□□□□ 0.85
GNEQ9Y223 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
GNEQ9Y223 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
GNEQ9Y223 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
GNEQ9Y223 AC005332.7-201ENST00000614046 2005 ntBASIC20.32■□□□□ 0.84
GNEQ9Y223 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GNEQ9Y223 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.32■□□□□ 0.84
GNEQ9Y223 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.32■□□□□ 0.84
GNEQ9Y223 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
GNEQ9Y223 LINC00602-201ENST00000629776 2065 ntBASIC20.32■□□□□ 0.84
GNEQ9Y223 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.32■□□□□ 0.84
GNEQ9Y223 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.32■□□□□ 0.84
GNEQ9Y223 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GNEQ9Y223 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GNEQ9Y223 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.32■□□□□ 0.84
GNEQ9Y223 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.32■□□□□ 0.84
GNEQ9Y223 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
GNEQ9Y223 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.32■□□□□ 0.84
GNEQ9Y223 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.32■□□□□ 0.84
GNEQ9Y223 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.32■□□□□ 0.84
GNEQ9Y223 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.32■□□□□ 0.84
GNEQ9Y223 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
GNEQ9Y223 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GNEQ9Y223 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GNEQ9Y223 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.32■□□□□ 0.84
GNEQ9Y223 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
GNEQ9Y223 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
GNEQ9Y223 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.32■□□□□ 0.84
GNEQ9Y223 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GNEQ9Y223 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GNEQ9Y223 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.31■□□□□ 0.84
GNEQ9Y223 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.31■□□□□ 0.84
GNEQ9Y223 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
GNEQ9Y223 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GNEQ9Y223 AP005117.1-201ENST00000584346 1413 ntBASIC20.31■□□□□ 0.84
GNEQ9Y223 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.31■□□□□ 0.84
GNEQ9Y223 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms