Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.66■□□□□ 0.58
CHMP2BQ9UQN3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP2BQ9UQN3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP2BQ9UQN3 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP2BQ9UQN3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CHMP2BQ9UQN3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CHMP2BQ9UQN3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.66■□□□□ 0.58
CHMP2BQ9UQN3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.66■□□□□ 0.58
CHMP2BQ9UQN3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP2BQ9UQN3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP2BQ9UQN3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP2BQ9UQN3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CHMP2BQ9UQN3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CHMP2BQ9UQN3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP2BQ9UQN3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CHMP2BQ9UQN3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP2BQ9UQN3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP2BQ9UQN3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
CHMP2BQ9UQN3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP2BQ9UQN3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP2BQ9UQN3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CHMP2BQ9UQN3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMP2BQ9UQN3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP2BQ9UQN3 FLJ13224-201ENST00000313737 1514 ntBASIC18.65■□□□□ 0.58
CHMP2BQ9UQN3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP2BQ9UQN3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP2BQ9UQN3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP2BQ9UQN3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMP2BQ9UQN3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMP2BQ9UQN3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CHMP2BQ9UQN3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP2BQ9UQN3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.65■□□□□ 0.58
CHMP2BQ9UQN3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CHMP2BQ9UQN3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMP2BQ9UQN3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMP2BQ9UQN3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.65■□□□□ 0.58
CHMP2BQ9UQN3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.65■□□□□ 0.58
CHMP2BQ9UQN3 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMP2BQ9UQN3 DGCR10-201ENST00000609839 495 ntBASIC18.65■□□□□ 0.58
CHMP2BQ9UQN3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CHMP2BQ9UQN3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP2BQ9UQN3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CHMP2BQ9UQN3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.65■□□□□ 0.58
CHMP2BQ9UQN3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP2BQ9UQN3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.65■□□□□ 0.58
CHMP2BQ9UQN3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP2BQ9UQN3 PHGDH-209ENST00000641074 1780 ntBASIC18.65■□□□□ 0.58
CHMP2BQ9UQN3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.65■□□□□ 0.58
CHMP2BQ9UQN3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMP2BQ9UQN3 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP2BQ9UQN3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP2BQ9UQN3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CHMP2BQ9UQN3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CHMP2BQ9UQN3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHMP2BQ9UQN3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.64■□□□□ 0.58
CHMP2BQ9UQN3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHMP2BQ9UQN3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
CHMP2BQ9UQN3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP2BQ9UQN3 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP2BQ9UQN3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP2BQ9UQN3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CHMP2BQ9UQN3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
CHMP2BQ9UQN3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP2BQ9UQN3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP2BQ9UQN3 SLC25A6P5-201ENST00000435663 894 ntBASIC18.64■□□□□ 0.57
CHMP2BQ9UQN3 AC097488.1-201ENST00000507834 756 ntBASIC18.64■□□□□ 0.57
CHMP2BQ9UQN3 NUDT16P1-203ENST00000513809 620 ntBASIC18.64■□□□□ 0.57
CHMP2BQ9UQN3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.64■□□□□ 0.57
CHMP2BQ9UQN3 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP2BQ9UQN3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP2BQ9UQN3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CHMP2BQ9UQN3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.64■□□□□ 0.57
CHMP2BQ9UQN3 AL135905.2-201ENST00000584934 1404 ntBASIC18.64■□□□□ 0.57
CHMP2BQ9UQN3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.64■□□□□ 0.57
CHMP2BQ9UQN3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.64■□□□□ 0.57
CHMP2BQ9UQN3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP2BQ9UQN3 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP2BQ9UQN3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP2BQ9UQN3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP2BQ9UQN3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 KRT18P29-201ENST00000397031 1267 ntBASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.63■□□□□ 0.57
CHMP2BQ9UQN3 FAM201B-201ENST00000458407 597 ntBASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms