Protein–RNA interactions for Protein: Q9UPW0

FOXJ3, Forkhead box protein J3, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXJ3Q9UPW0 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.02■□□□□ 0.16
FOXJ3Q9UPW0 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
FOXJ3Q9UPW0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
FOXJ3Q9UPW0 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.02■□□□□ 0.15
FOXJ3Q9UPW0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.02■□□□□ 0.15
FOXJ3Q9UPW0 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
FOXJ3Q9UPW0 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.02■□□□□ 0.15
FOXJ3Q9UPW0 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
FOXJ3Q9UPW0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
FOXJ3Q9UPW0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FOXJ3Q9UPW0 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
FOXJ3Q9UPW0 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
FOXJ3Q9UPW0 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.15
FOXJ3Q9UPW0 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
FOXJ3Q9UPW0 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
FOXJ3Q9UPW0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.02■□□□□ 0.15
FOXJ3Q9UPW0 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 KSR1P1-201ENST00000446298 240 ntBASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 UBE2SP1-201ENST00000450587 669 ntBASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 AC133681.1-201ENST00000465482 601 ntBASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
FOXJ3Q9UPW0 GMCL1P1-201ENST00000463439 1581 ntBASIC16■□□□□ 0.15
FOXJ3Q9UPW0 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
FOXJ3Q9UPW0 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16■□□□□ 0.15
FOXJ3Q9UPW0 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXJ3Q9UPW0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16■□□□□ 0.15
FOXJ3Q9UPW0 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXJ3Q9UPW0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16■□□□□ 0.15
FOXJ3Q9UPW0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXJ3Q9UPW0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16■□□□□ 0.15
FOXJ3Q9UPW0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16■□□□□ 0.15
FOXJ3Q9UPW0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXJ3Q9UPW0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXJ3Q9UPW0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
FOXJ3Q9UPW0 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16■□□□□ 0.15
FOXJ3Q9UPW0 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16■□□□□ 0.15
FOXJ3Q9UPW0 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXJ3Q9UPW0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
FOXJ3Q9UPW0 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
FOXJ3Q9UPW0 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16■□□□□ 0.15
FOXJ3Q9UPW0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16■□□□□ 0.15
FOXJ3Q9UPW0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16■□□□□ 0.15
FOXJ3Q9UPW0 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16■□□□□ 0.15
FOXJ3Q9UPW0 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16■□□□□ 0.15
FOXJ3Q9UPW0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16■□□□□ 0.15
FOXJ3Q9UPW0 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16■□□□□ 0.15
FOXJ3Q9UPW0 AC110285.5-201ENST00000611501 352 ntBASIC16■□□□□ 0.15
FOXJ3Q9UPW0 AC080080.1-201ENST00000625121 2420 ntBASIC16■□□□□ 0.15
FOXJ3Q9UPW0 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXJ3Q9UPW0 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
FOXJ3Q9UPW0 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXJ3Q9UPW0 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXJ3Q9UPW0 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
FOXJ3Q9UPW0 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
FOXJ3Q9UPW0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms