Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 KRT18P23-201ENST00000435622 1283 ntBASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 AC092329.2-201ENST00000598402 547 ntBASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 AL121672.3-201ENST00000608644 468 ntBASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 AC079602.3-201ENST00000623931 403 ntBASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 AC008556.1-201ENST00000610908 2040 ntBASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NPIPA1Q9UND3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
NPIPA1Q9UND3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.89■□□□□ 0.3
NPIPA1Q9UND3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA1Q9UND3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.89■□□□□ 0.29
NPIPA1Q9UND3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.29
NPIPA1Q9UND3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA1Q9UND3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA1Q9UND3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA1Q9UND3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
NPIPA1Q9UND3 AL109659.2-201ENST00000606809 1674 ntBASIC16.89■□□□□ 0.29
NPIPA1Q9UND3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA1Q9UND3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA1Q9UND3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA1Q9UND3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA1Q9UND3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.89■□□□□ 0.29
NPIPA1Q9UND3 TPM4P1-201ENST00000436100 807 ntBASIC16.89■□□□□ 0.29
NPIPA1Q9UND3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
NPIPA1Q9UND3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.89■□□□□ 0.29
NPIPA1Q9UND3 TSSC2-201ENST00000450217 709 ntBASIC16.89■□□□□ 0.29
NPIPA1Q9UND3 MIR3917-201ENST00000580971 93 ntBASIC16.89■□□□□ 0.29
NPIPA1Q9UND3 AL136038.4-201ENST00000603606 1261 ntBASIC16.89■□□□□ 0.29
NPIPA1Q9UND3 NPAP1P7-201ENST00000613027 823 ntBASIC16.89■□□□□ 0.29
NPIPA1Q9UND3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA1Q9UND3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA1Q9UND3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA1Q9UND3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA1Q9UND3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA1Q9UND3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA1Q9UND3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA1Q9UND3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.89■□□□□ 0.29
NPIPA1Q9UND3 AL031598.1-201ENST00000561511 1773 ntBASIC16.89■□□□□ 0.29
NPIPA1Q9UND3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
NPIPA1Q9UND3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
NPIPA1Q9UND3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NPIPA1Q9UND3 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
NPIPA1Q9UND3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.89■□□□□ 0.29
NPIPA1Q9UND3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
NPIPA1Q9UND3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 MIR3652-201ENST00000579335 131 ntBASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 AL691432.3-201ENST00000621860 400 ntBASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 AL162741.1-201ENST00000565563 1558 ntBASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
NPIPA1Q9UND3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA1Q9UND3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.87■□□□□ 0.29
NPIPA1Q9UND3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA1Q9UND3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.87■□□□□ 0.29
NPIPA1Q9UND3 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.87■□□□□ 0.29
NPIPA1Q9UND3 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NPIPA1Q9UND3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms