Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
DKK4Q9UBT3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
DKK4Q9UBT3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
DKK4Q9UBT3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.99■□□□□ 0.31
DKK4Q9UBT3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
DKK4Q9UBT3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.99■□□□□ 0.31
DKK4Q9UBT3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
DKK4Q9UBT3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC16.99■□□□□ 0.31
DKK4Q9UBT3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
DKK4Q9UBT3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
DKK4Q9UBT3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.98■□□□□ 0.31
DKK4Q9UBT3 ELL2P1-201ENST00000413990 1906 ntBASIC16.98■□□□□ 0.31
DKK4Q9UBT3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.98■□□□□ 0.31
DKK4Q9UBT3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.98■□□□□ 0.31
DKK4Q9UBT3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.98■□□□□ 0.31
DKK4Q9UBT3 MIR149-201ENST00000384879 89 ntBASIC16.98■□□□□ 0.31
DKK4Q9UBT3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.98■□□□□ 0.31
DKK4Q9UBT3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.98■□□□□ 0.31
DKK4Q9UBT3 BCRP1-201ENST00000444246 691 ntBASIC16.98■□□□□ 0.31
DKK4Q9UBT3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
DKK4Q9UBT3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
DKK4Q9UBT3 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.98■□□□□ 0.31
DKK4Q9UBT3 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
DKK4Q9UBT3 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.98■□□□□ 0.31
DKK4Q9UBT3 AC106028.4-201ENST00000614509 607 ntBASIC16.98■□□□□ 0.31
DKK4Q9UBT3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.98■□□□□ 0.31
DKK4Q9UBT3 AL022326.1-202ENST00000641533 845 ntBASIC16.98■□□□□ 0.31
DKK4Q9UBT3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.98■□□□□ 0.31
DKK4Q9UBT3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
DKK4Q9UBT3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.98■□□□□ 0.31
DKK4Q9UBT3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
DKK4Q9UBT3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DKK4Q9UBT3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
DKK4Q9UBT3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
DKK4Q9UBT3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
DKK4Q9UBT3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
DKK4Q9UBT3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
DKK4Q9UBT3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.97■□□□□ 0.31
DKK4Q9UBT3 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.97■□□□□ 0.31
DKK4Q9UBT3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.97■□□□□ 0.31
DKK4Q9UBT3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
DKK4Q9UBT3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.97■□□□□ 0.31
DKK4Q9UBT3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.97■□□□□ 0.31
DKK4Q9UBT3 AC136632.2-201ENST00000512891 861 ntBASIC16.97■□□□□ 0.31
DKK4Q9UBT3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.97■□□□□ 0.31
DKK4Q9UBT3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.97■□□□□ 0.31
DKK4Q9UBT3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.97■□□□□ 0.31
DKK4Q9UBT3 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DKK4Q9UBT3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DKK4Q9UBT3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
DKK4Q9UBT3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.97■□□□□ 0.31
DKK4Q9UBT3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
DKK4Q9UBT3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.97■□□□□ 0.31
DKK4Q9UBT3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
DKK4Q9UBT3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
DKK4Q9UBT3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.97■□□□□ 0.31
DKK4Q9UBT3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DKK4Q9UBT3 AC097374.2-201ENST00000618617 1306 ntBASIC16.96■□□□□ 0.31
DKK4Q9UBT3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
DKK4Q9UBT3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
DKK4Q9UBT3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
DKK4Q9UBT3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DKK4Q9UBT3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.96■□□□□ 0.31
DKK4Q9UBT3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
DKK4Q9UBT3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
DKK4Q9UBT3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
DKK4Q9UBT3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
DKK4Q9UBT3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DKK4Q9UBT3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.96■□□□□ 0.31
DKK4Q9UBT3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
DKK4Q9UBT3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
DKK4Q9UBT3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.96■□□□□ 0.31
DKK4Q9UBT3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.96■□□□□ 0.31
DKK4Q9UBT3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.96■□□□□ 0.31
DKK4Q9UBT3 PRYP5-201ENST00000451909 266 ntBASIC16.96■□□□□ 0.31
DKK4Q9UBT3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
DKK4Q9UBT3 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.96■□□□□ 0.31
DKK4Q9UBT3 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.96■□□□□ 0.31
DKK4Q9UBT3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.96■□□□□ 0.31
DKK4Q9UBT3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.96■□□□□ 0.31
DKK4Q9UBT3 AL513190.1-201ENST00000621254 727 ntBASIC16.96■□□□□ 0.31
DKK4Q9UBT3 AC073592.4-201ENST00000623827 446 ntBASIC16.96■□□□□ 0.31
DKK4Q9UBT3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DKK4Q9UBT3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.96■□□□□ 0.31
DKK4Q9UBT3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.96■□□□□ 0.31
DKK4Q9UBT3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
DKK4Q9UBT3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.96■□□□□ 0.31
DKK4Q9UBT3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
DKK4Q9UBT3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.96■□□□□ 0.3
DKK4Q9UBT3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.96■□□□□ 0.3
DKK4Q9UBT3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
DKK4Q9UBT3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
DKK4Q9UBT3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.96■□□□□ 0.3
DKK4Q9UBT3 AC079776.2-201ENST00000641154 1609 ntBASIC16.96■□□□□ 0.3
DKK4Q9UBT3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
DKK4Q9UBT3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.95■□□□□ 0.3
DKK4Q9UBT3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
DKK4Q9UBT3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.95■□□□□ 0.3
DKK4Q9UBT3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
DKK4Q9UBT3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms