Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.98■□□□□ 0.63
HCFC1R1Q9NWW0 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HCFC1R1Q9NWW0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HCFC1R1Q9NWW0 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HCFC1R1Q9NWW0 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.98■□□□□ 0.63
HCFC1R1Q9NWW0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HCFC1R1Q9NWW0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HCFC1R1Q9NWW0 AC112777.1-201ENST00000540175 1423 ntBASIC18.98■□□□□ 0.63
HCFC1R1Q9NWW0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
HCFC1R1Q9NWW0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HCFC1R1Q9NWW0 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HCFC1R1Q9NWW0 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.98■□□□□ 0.63
HCFC1R1Q9NWW0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.98■□□□□ 0.63
HCFC1R1Q9NWW0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.98■□□□□ 0.63
HCFC1R1Q9NWW0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HCFC1R1Q9NWW0 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.97■□□□□ 0.63
HCFC1R1Q9NWW0 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC1R1Q9NWW0 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HCFC1R1Q9NWW0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC1R1Q9NWW0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.97■□□□□ 0.63
HCFC1R1Q9NWW0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.97■□□□□ 0.63
HCFC1R1Q9NWW0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC1R1Q9NWW0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC1R1Q9NWW0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC1R1Q9NWW0 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC1R1Q9NWW0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.97■□□□□ 0.63
HCFC1R1Q9NWW0 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.97■□□□□ 0.63
HCFC1R1Q9NWW0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
HCFC1R1Q9NWW0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC1R1Q9NWW0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC1R1Q9NWW0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC1R1Q9NWW0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.97■□□□□ 0.63
HCFC1R1Q9NWW0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC1R1Q9NWW0 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC1R1Q9NWW0 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC1R1Q9NWW0 MTCL1P1-201ENST00000446207 792 ntBASIC18.97■□□□□ 0.63
HCFC1R1Q9NWW0 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
HCFC1R1Q9NWW0 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.97■□□□□ 0.63
HCFC1R1Q9NWW0 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.97■□□□□ 0.63
HCFC1R1Q9NWW0 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC1R1Q9NWW0 AP001269.4-201ENST00000609611 512 ntBASIC18.97■□□□□ 0.63
HCFC1R1Q9NWW0 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC1R1Q9NWW0 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.97■□□□□ 0.63
HCFC1R1Q9NWW0 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC1R1Q9NWW0 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC1R1Q9NWW0 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC1R1Q9NWW0 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC1R1Q9NWW0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HCFC1R1Q9NWW0 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
HCFC1R1Q9NWW0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HCFC1R1Q9NWW0 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HCFC1R1Q9NWW0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
HCFC1R1Q9NWW0 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.96■□□□□ 0.63
HCFC1R1Q9NWW0 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HCFC1R1Q9NWW0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.96■□□□□ 0.63
HCFC1R1Q9NWW0 FGFR3P6-201ENST00000457012 610 ntBASIC18.96■□□□□ 0.63
HCFC1R1Q9NWW0 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.96■□□□□ 0.63
HCFC1R1Q9NWW0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.96■□□□□ 0.63
HCFC1R1Q9NWW0 MTDHP3-201ENST00000594186 672 ntBASIC18.96■□□□□ 0.63
HCFC1R1Q9NWW0 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.96■□□□□ 0.63
HCFC1R1Q9NWW0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.96■□□□□ 0.63
HCFC1R1Q9NWW0 AL355877.3-201ENST00000622820 899 ntBASIC18.96■□□□□ 0.63
HCFC1R1Q9NWW0 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HCFC1R1Q9NWW0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.96■□□□□ 0.63
HCFC1R1Q9NWW0 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HCFC1R1Q9NWW0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HCFC1R1Q9NWW0 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HCFC1R1Q9NWW0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HCFC1R1Q9NWW0 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HCFC1R1Q9NWW0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HCFC1R1Q9NWW0 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HCFC1R1Q9NWW0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.95■□□□□ 0.62
HCFC1R1Q9NWW0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HCFC1R1Q9NWW0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HCFC1R1Q9NWW0 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HCFC1R1Q9NWW0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HCFC1R1Q9NWW0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.95■□□□□ 0.62
HCFC1R1Q9NWW0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HCFC1R1Q9NWW0 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HCFC1R1Q9NWW0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HCFC1R1Q9NWW0 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HCFC1R1Q9NWW0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.95■□□□□ 0.62
HCFC1R1Q9NWW0 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
HCFC1R1Q9NWW0 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.95■□□□□ 0.62
HCFC1R1Q9NWW0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.95■□□□□ 0.62
HCFC1R1Q9NWW0 AC018712.1-201ENST00000455767 687 ntBASIC18.95■□□□□ 0.62
HCFC1R1Q9NWW0 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
HCFC1R1Q9NWW0 RNPS1P1-201ENST00000507437 918 ntBASIC18.95■□□□□ 0.62
HCFC1R1Q9NWW0 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.95■□□□□ 0.62
HCFC1R1Q9NWW0 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.95■□□□□ 0.62
HCFC1R1Q9NWW0 MIR7706-201ENST00000613747 67 ntBASIC18.95■□□□□ 0.62
HCFC1R1Q9NWW0 AC009154.2-201ENST00000621177 724 ntBASIC18.95■□□□□ 0.62
HCFC1R1Q9NWW0 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HCFC1R1Q9NWW0 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.95■□□□□ 0.62
HCFC1R1Q9NWW0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HCFC1R1Q9NWW0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HCFC1R1Q9NWW0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HCFC1R1Q9NWW0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HCFC1R1Q9NWW0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HCFC1R1Q9NWW0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms