Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 CD37-204ENST00000535669 1674 ntTSL 2 BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 AC006058.4-201ENST00000624016 1670 ntBASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42SE1Q9NRR8 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 CYP2T1P-202ENST00000641596 2535 ntBASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 OR7E47P-201ENST00000546390 1422 ntBASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 AL731571.1-201ENST00000617058 5428 ntBASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC9.38□□□□□ -0.91
CDC42SE1Q9NRR8 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 AL359258.3-201ENST00000622910 2331 ntBASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 AC141586.3-201ENST00000562166 1838 ntBASIC9.37□□□□□ -0.91
CDC42SE1Q9NRR8 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC9.37□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms