Protein–RNA interactions for Protein: Q9NRG0

CHRAC1, Chromatin accessibility complex protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRAC1Q9NRG0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHRAC1Q9NRG0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.45■□□□□ 0.54
CHRAC1Q9NRG0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CHRAC1Q9NRG0 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHRAC1Q9NRG0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHRAC1Q9NRG0 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHRAC1Q9NRG0 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHRAC1Q9NRG0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CHRAC1Q9NRG0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRAC1Q9NRG0 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRAC1Q9NRG0 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRAC1Q9NRG0 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRAC1Q9NRG0 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRAC1Q9NRG0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRAC1Q9NRG0 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRAC1Q9NRG0 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.44■□□□□ 0.54
CHRAC1Q9NRG0 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.44■□□□□ 0.54
CHRAC1Q9NRG0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.44■□□□□ 0.54
CHRAC1Q9NRG0 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRAC1Q9NRG0 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHRAC1Q9NRG0 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRAC1Q9NRG0 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHRAC1Q9NRG0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRAC1Q9NRG0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHRAC1Q9NRG0 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHRAC1Q9NRG0 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRAC1Q9NRG0 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRAC1Q9NRG0 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRAC1Q9NRG0 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CHRAC1Q9NRG0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRAC1Q9NRG0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRAC1Q9NRG0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CHRAC1Q9NRG0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CHRAC1Q9NRG0 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHRAC1Q9NRG0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRAC1Q9NRG0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CHRAC1Q9NRG0 LINC01126-201ENST00000623515 1646 ntBASIC18.43■□□□□ 0.54
CHRAC1Q9NRG0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRAC1Q9NRG0 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.43■□□□□ 0.54
CHRAC1Q9NRG0 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHRAC1Q9NRG0 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRAC1Q9NRG0 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.43■□□□□ 0.54
CHRAC1Q9NRG0 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHRAC1Q9NRG0 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.43■□□□□ 0.54
CHRAC1Q9NRG0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.43■□□□□ 0.54
CHRAC1Q9NRG0 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.43■□□□□ 0.54
CHRAC1Q9NRG0 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.43■□□□□ 0.54
CHRAC1Q9NRG0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.43■□□□□ 0.54
CHRAC1Q9NRG0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHRAC1Q9NRG0 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.43■□□□□ 0.54
CHRAC1Q9NRG0 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRAC1Q9NRG0 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CHRAC1Q9NRG0 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
CHRAC1Q9NRG0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHRAC1Q9NRG0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRAC1Q9NRG0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.43■□□□□ 0.54
CHRAC1Q9NRG0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRAC1Q9NRG0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.43■□□□□ 0.54
CHRAC1Q9NRG0 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.43■□□□□ 0.54
CHRAC1Q9NRG0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.43■□□□□ 0.54
CHRAC1Q9NRG0 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRAC1Q9NRG0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.43■□□□□ 0.54
CHRAC1Q9NRG0 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRAC1Q9NRG0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.42■□□□□ 0.54
CHRAC1Q9NRG0 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRAC1Q9NRG0 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.42■□□□□ 0.54
CHRAC1Q9NRG0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.42■□□□□ 0.54
CHRAC1Q9NRG0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
CHRAC1Q9NRG0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CHRAC1Q9NRG0 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRAC1Q9NRG0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHRAC1Q9NRG0 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRAC1Q9NRG0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRAC1Q9NRG0 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.42■□□□□ 0.54
CHRAC1Q9NRG0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHRAC1Q9NRG0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.42■□□□□ 0.54
CHRAC1Q9NRG0 AC009947.2-201ENST00000444014 672 ntBASIC18.42■□□□□ 0.54
CHRAC1Q9NRG0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.42■□□□□ 0.54
CHRAC1Q9NRG0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.42■□□□□ 0.54
CHRAC1Q9NRG0 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.42■□□□□ 0.54
CHRAC1Q9NRG0 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
CHRAC1Q9NRG0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHRAC1Q9NRG0 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRAC1Q9NRG0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRAC1Q9NRG0 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.42■□□□□ 0.54
CHRAC1Q9NRG0 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.42■□□□□ 0.54
CHRAC1Q9NRG0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRAC1Q9NRG0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRAC1Q9NRG0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.42■□□□□ 0.54
CHRAC1Q9NRG0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHRAC1Q9NRG0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.42■□□□□ 0.54
CHRAC1Q9NRG0 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CHRAC1Q9NRG0 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHRAC1Q9NRG0 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRAC1Q9NRG0 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHRAC1Q9NRG0 LINC01568-207ENST00000641790 1380 ntBASIC18.42■□□□□ 0.54
CHRAC1Q9NRG0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHRAC1Q9NRG0 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.41■□□□□ 0.54
CHRAC1Q9NRG0 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHRAC1Q9NRG0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms