Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
TLR9Q9NR96 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TLR9Q9NR96 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.37■□□□□ 0.69
TLR9Q9NR96 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.37■□□□□ 0.69
TLR9Q9NR96 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TLR9Q9NR96 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
TLR9Q9NR96 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TLR9Q9NR96 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.37■□□□□ 0.69
TLR9Q9NR96 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.37■□□□□ 0.69
TLR9Q9NR96 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TLR9Q9NR96 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.37■□□□□ 0.69
TLR9Q9NR96 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.37■□□□□ 0.69
TLR9Q9NR96 RPS2P28-201ENST00000314255 741 ntBASIC19.37■□□□□ 0.69
TLR9Q9NR96 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TLR9Q9NR96 FAM220CP-201ENST00000395253 831 ntBASIC19.37■□□□□ 0.69
TLR9Q9NR96 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.37■□□□□ 0.69
TLR9Q9NR96 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
TLR9Q9NR96 BX842568.4-201ENST00000421222 227 ntBASIC19.37■□□□□ 0.69
TLR9Q9NR96 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.37■□□□□ 0.69
TLR9Q9NR96 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.37■□□□□ 0.69
TLR9Q9NR96 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.37■□□□□ 0.69
TLR9Q9NR96 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TLR9Q9NR96 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TLR9Q9NR96 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TLR9Q9NR96 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TLR9Q9NR96 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TLR9Q9NR96 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.37■□□□□ 0.69
TLR9Q9NR96 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.36■□□□□ 0.69
TLR9Q9NR96 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TLR9Q9NR96 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TLR9Q9NR96 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TLR9Q9NR96 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.36■□□□□ 0.69
TLR9Q9NR96 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TLR9Q9NR96 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TLR9Q9NR96 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TLR9Q9NR96 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TLR9Q9NR96 AC009102.3-201ENST00000623118 1491 ntBASIC19.36■□□□□ 0.69
TLR9Q9NR96 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TLR9Q9NR96 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.36■□□□□ 0.69
TLR9Q9NR96 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TLR9Q9NR96 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TLR9Q9NR96 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TLR9Q9NR96 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
TLR9Q9NR96 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TLR9Q9NR96 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TLR9Q9NR96 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TLR9Q9NR96 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.36■□□□□ 0.69
TLR9Q9NR96 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.36■□□□□ 0.69
TLR9Q9NR96 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TLR9Q9NR96 AC068472.1-201ENST00000474589 881 ntBASIC19.36■□□□□ 0.69
TLR9Q9NR96 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.36■□□□□ 0.69
TLR9Q9NR96 AC009533.2-201ENST00000543664 586 ntBASIC19.36■□□□□ 0.69
TLR9Q9NR96 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.36■□□□□ 0.69
TLR9Q9NR96 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TLR9Q9NR96 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.36■□□□□ 0.69
TLR9Q9NR96 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TLR9Q9NR96 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TLR9Q9NR96 AC087289.5-201ENST00000586076 3175 ntBASIC19.36■□□□□ 0.69
TLR9Q9NR96 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TLR9Q9NR96 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TLR9Q9NR96 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TLR9Q9NR96 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.36■□□□□ 0.69
TLR9Q9NR96 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.36■□□□□ 0.69
TLR9Q9NR96 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
TLR9Q9NR96 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TLR9Q9NR96 AL020996.1-203ENST00000536896 2307 ntBASIC19.36■□□□□ 0.69
TLR9Q9NR96 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TLR9Q9NR96 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TLR9Q9NR96 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.36■□□□□ 0.69
TLR9Q9NR96 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TLR9Q9NR96 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TLR9Q9NR96 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TLR9Q9NR96 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TLR9Q9NR96 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TLR9Q9NR96 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
TLR9Q9NR96 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TLR9Q9NR96 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.35■□□□□ 0.69
TLR9Q9NR96 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TLR9Q9NR96 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TLR9Q9NR96 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TLR9Q9NR96 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TLR9Q9NR96 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TLR9Q9NR96 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TLR9Q9NR96 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TLR9Q9NR96 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.35■□□□□ 0.69
TLR9Q9NR96 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TLR9Q9NR96 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TLR9Q9NR96 HMGN1P19-201ENST00000436976 333 ntBASIC19.35■□□□□ 0.69
TLR9Q9NR96 HNRNPDP1-201ENST00000439535 754 ntBASIC19.35■□□□□ 0.69
TLR9Q9NR96 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.35■□□□□ 0.69
TLR9Q9NR96 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.35■□□□□ 0.69
TLR9Q9NR96 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TLR9Q9NR96 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.35■□□□□ 0.69
TLR9Q9NR96 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.35■□□□□ 0.69
TLR9Q9NR96 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TLR9Q9NR96 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TLR9Q9NR96 AP001269.4-201ENST00000609611 512 ntBASIC19.35■□□□□ 0.69
TLR9Q9NR96 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TLR9Q9NR96 AC116407.3-201ENST00000623905 1129 ntBASIC19.35■□□□□ 0.69
TLR9Q9NR96 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms