Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.45■□□□□ 0.86
PDLIM7Q9NR12 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PDLIM7Q9NR12 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.44■□□□□ 0.86
PDLIM7Q9NR12 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDLIM7Q9NR12 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDLIM7Q9NR12 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDLIM7Q9NR12 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDLIM7Q9NR12 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.44■□□□□ 0.86
PDLIM7Q9NR12 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PDLIM7Q9NR12 RPL13AP23-201ENST00000480739 586 ntBASIC20.44■□□□□ 0.86
PDLIM7Q9NR12 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.44■□□□□ 0.86
PDLIM7Q9NR12 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.44■□□□□ 0.86
PDLIM7Q9NR12 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.44■□□□□ 0.86
PDLIM7Q9NR12 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.44■□□□□ 0.86
PDLIM7Q9NR12 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.44■□□□□ 0.86
PDLIM7Q9NR12 BNIP3P18-201ENST00000593976 575 ntBASIC20.44■□□□□ 0.86
PDLIM7Q9NR12 AC024563.2-201ENST00000603282 481 ntBASIC20.44■□□□□ 0.86
PDLIM7Q9NR12 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.44■□□□□ 0.86
PDLIM7Q9NR12 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDLIM7Q9NR12 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PDLIM7Q9NR12 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PDLIM7Q9NR12 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
PDLIM7Q9NR12 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDLIM7Q9NR12 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.43■□□□□ 0.86
PDLIM7Q9NR12 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDLIM7Q9NR12 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.43■□□□□ 0.86
PDLIM7Q9NR12 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.43■□□□□ 0.86
PDLIM7Q9NR12 AC073648.2-201ENST00000510116 352 ntBASIC20.43■□□□□ 0.86
PDLIM7Q9NR12 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.43■□□□□ 0.86
PDLIM7Q9NR12 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PDLIM7Q9NR12 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.43■□□□□ 0.86
PDLIM7Q9NR12 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.43■□□□□ 0.86
PDLIM7Q9NR12 AL591684.3-201ENST00000605187 298 ntBASIC20.43■□□□□ 0.86
PDLIM7Q9NR12 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.43■□□□□ 0.86
PDLIM7Q9NR12 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PDLIM7Q9NR12 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDLIM7Q9NR12 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDLIM7Q9NR12 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDLIM7Q9NR12 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PDLIM7Q9NR12 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PDLIM7Q9NR12 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.43■□□□□ 0.86
PDLIM7Q9NR12 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PDLIM7Q9NR12 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM7Q9NR12 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.42■□□□□ 0.86
PDLIM7Q9NR12 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM7Q9NR12 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM7Q9NR12 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM7Q9NR12 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM7Q9NR12 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20.42■□□□□ 0.86
PDLIM7Q9NR12 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM7Q9NR12 AC005104.2-201ENST00000427818 678 ntBASIC20.42■□□□□ 0.86
PDLIM7Q9NR12 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.42■□□□□ 0.86
PDLIM7Q9NR12 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM7Q9NR12 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.42■□□□□ 0.86
PDLIM7Q9NR12 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.42■□□□□ 0.86
PDLIM7Q9NR12 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
PDLIM7Q9NR12 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM7Q9NR12 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.42■□□□□ 0.86
PDLIM7Q9NR12 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM7Q9NR12 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM7Q9NR12 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
PDLIM7Q9NR12 AL353692.3-201ENST00000407031 1396 ntBASIC20.42■□□□□ 0.86
PDLIM7Q9NR12 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM7Q9NR12 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM7Q9NR12 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM7Q9NR12 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PDLIM7Q9NR12 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM7Q9NR12 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM7Q9NR12 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM7Q9NR12 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.41■□□□□ 0.86
PDLIM7Q9NR12 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM7Q9NR12 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM7Q9NR12 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM7Q9NR12 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM7Q9NR12 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM7Q9NR12 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM7Q9NR12 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.41■□□□□ 0.86
PDLIM7Q9NR12 HMGN1P19-201ENST00000436976 333 ntBASIC20.41■□□□□ 0.86
PDLIM7Q9NR12 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
PDLIM7Q9NR12 AC139887.3-201ENST00000568585 713 ntBASIC20.41■□□□□ 0.86
PDLIM7Q9NR12 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM7Q9NR12 AC011840.4-201ENST00000578471 627 ntBASIC20.41■□□□□ 0.86
PDLIM7Q9NR12 MIR5100-201ENST00000579544 119 ntBASIC20.41■□□□□ 0.86
PDLIM7Q9NR12 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.41■□□□□ 0.86
PDLIM7Q9NR12 AC008608.2-201ENST00000606089 416 ntBASIC20.41■□□□□ 0.86
PDLIM7Q9NR12 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM7Q9NR12 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
PDLIM7Q9NR12 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM7Q9NR12 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PDLIM7Q9NR12 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM7Q9NR12 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM7Q9NR12 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM7Q9NR12 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.41■□□□□ 0.86
PDLIM7Q9NR12 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.41■□□□□ 0.86
PDLIM7Q9NR12 SDHAP2-201ENST00000455183 2001 ntBASIC20.41■□□□□ 0.86
PDLIM7Q9NR12 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.41■□□□□ 0.86
PDLIM7Q9NR12 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM7Q9NR12 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PDLIM7Q9NR12 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDLIM7Q9NR12 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms