Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF39Q9H2S5 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RNF39Q9H2S5 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.38■□□□□ 0.85
RNF39Q9H2S5 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF39Q9H2S5 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.38■□□□□ 0.85
RNF39Q9H2S5 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF39Q9H2S5 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
RNF39Q9H2S5 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
RNF39Q9H2S5 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF39Q9H2S5 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF39Q9H2S5 NIPA2P4-201ENST00000523928 1341 ntBASIC20.37■□□□□ 0.85
RNF39Q9H2S5 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF39Q9H2S5 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
RNF39Q9H2S5 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF39Q9H2S5 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF39Q9H2S5 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF39Q9H2S5 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.37■□□□□ 0.85
RNF39Q9H2S5 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.37■□□□□ 0.85
RNF39Q9H2S5 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF39Q9H2S5 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
RNF39Q9H2S5 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.37■□□□□ 0.85
RNF39Q9H2S5 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC20.37■□□□□ 0.85
RNF39Q9H2S5 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
RNF39Q9H2S5 CISD2-202ENST00000503643 808 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF39Q9H2S5 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.37■□□□□ 0.85
RNF39Q9H2S5 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.37■□□□□ 0.85
RNF39Q9H2S5 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC20.37■□□□□ 0.85
RNF39Q9H2S5 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF39Q9H2S5 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
RNF39Q9H2S5 AC100847.1-201ENST00000611316 481 ntBASIC20.37■□□□□ 0.85
RNF39Q9H2S5 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF39Q9H2S5 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF39Q9H2S5 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
RNF39Q9H2S5 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
RNF39Q9H2S5 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF39Q9H2S5 AC095050.2-201ENST00000510748 1458 ntBASIC20.37■□□□□ 0.85
RNF39Q9H2S5 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.37■□□□□ 0.85
RNF39Q9H2S5 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF39Q9H2S5 LINC01311-201ENST00000565162 1445 ntBASIC20.36■□□□□ 0.85
RNF39Q9H2S5 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.36■□□□□ 0.85
RNF39Q9H2S5 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF39Q9H2S5 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF39Q9H2S5 ARL9-201ENST00000360096 1392 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF39Q9H2S5 IER3-202ENST00000376377 1350 ntBASIC20.36■□□□□ 0.85
RNF39Q9H2S5 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF39Q9H2S5 FP475955.4-201ENST00000623131 1990 ntBASIC20.36■□□□□ 0.85
RNF39Q9H2S5 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF39Q9H2S5 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF39Q9H2S5 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF39Q9H2S5 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF39Q9H2S5 LINC01284-201ENST00000442994 730 ntTSL 5 BASIC20.36■□□□□ 0.85
RNF39Q9H2S5 AP001885.1-202ENST00000444002 1255 ntBASIC20.36■□□□□ 0.85
RNF39Q9H2S5 Z99714.1-201ENST00000450463 807 ntBASIC20.36■□□□□ 0.85
RNF39Q9H2S5 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC20.36■□□□□ 0.85
RNF39Q9H2S5 RASA4DP-201ENST00000460726 1199 ntBASIC20.36■□□□□ 0.85
RNF39Q9H2S5 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF39Q9H2S5 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC20.36■□□□□ 0.85
RNF39Q9H2S5 RNU2-45P-201ENST00000516068 187 ntBASIC20.36■□□□□ 0.85
RNF39Q9H2S5 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
RNF39Q9H2S5 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.36■□□□□ 0.85
RNF39Q9H2S5 AC116407.4-201ENST00000623319 1061 ntBASIC20.36■□□□□ 0.85
RNF39Q9H2S5 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.36■□□□□ 0.85
RNF39Q9H2S5 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.36■□□□□ 0.85
RNF39Q9H2S5 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF39Q9H2S5 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
RNF39Q9H2S5 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF39Q9H2S5 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.35■□□□□ 0.85
RNF39Q9H2S5 AL109659.2-201ENST00000606809 1674 ntBASIC20.35■□□□□ 0.85
RNF39Q9H2S5 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF39Q9H2S5 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
RNF39Q9H2S5 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF39Q9H2S5 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF39Q9H2S5 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF39Q9H2S5 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RNF39Q9H2S5 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RNF39Q9H2S5 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF39Q9H2S5 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF39Q9H2S5 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF39Q9H2S5 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF39Q9H2S5 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF39Q9H2S5 LHFPL3-AS1-202ENST00000416376 866 ntTSL 3 BASIC20.35■□□□□ 0.85
RNF39Q9H2S5 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF39Q9H2S5 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF39Q9H2S5 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF39Q9H2S5 CCT6P1-203ENST00000443108 1170 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF39Q9H2S5 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF39Q9H2S5 SEC1P-202ENST00000473944 940 ntBASIC20.35■□□□□ 0.85
RNF39Q9H2S5 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF39Q9H2S5 ZNF444P1-201ENST00000559497 298 ntBASIC20.35■□□□□ 0.85
RNF39Q9H2S5 AL136038.3-201ENST00000561909 1096 ntBASIC20.35■□□□□ 0.85
RNF39Q9H2S5 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF39Q9H2S5 AP003117.1-201ENST00000602771 554 ntBASIC20.35■□□□□ 0.85
RNF39Q9H2S5 AC091614.1-201ENST00000606898 879 ntTSL 3 BASIC20.35■□□□□ 0.85
RNF39Q9H2S5 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF39Q9H2S5 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF39Q9H2S5 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RNF39Q9H2S5 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF39Q9H2S5 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF39Q9H2S5 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.35■□□□□ 0.85
RNF39Q9H2S5 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms