Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LHX5Q9H2C1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LHX5Q9H2C1 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LHX5Q9H2C1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LHX5Q9H2C1 AL391807.1-203ENST00000604392 2365 ntBASIC19.3■□□□□ 0.68
LHX5Q9H2C1 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LHX5Q9H2C1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.3■□□□□ 0.68
LHX5Q9H2C1 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LHX5Q9H2C1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LHX5Q9H2C1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
LHX5Q9H2C1 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LHX5Q9H2C1 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
LHX5Q9H2C1 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LHX5Q9H2C1 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LHX5Q9H2C1 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LHX5Q9H2C1 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LHX5Q9H2C1 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
LHX5Q9H2C1 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.3■□□□□ 0.68
LHX5Q9H2C1 HLA-F-220ENST00000434407 884 ntBASIC19.3■□□□□ 0.68
LHX5Q9H2C1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LHX5Q9H2C1 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LHX5Q9H2C1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LHX5Q9H2C1 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.3■□□□□ 0.68
LHX5Q9H2C1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LHX5Q9H2C1 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
LHX5Q9H2C1 NOC2LP1-202ENST00000452600 2235 ntBASIC19.3■□□□□ 0.68
LHX5Q9H2C1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LHX5Q9H2C1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
LHX5Q9H2C1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
LHX5Q9H2C1 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
LHX5Q9H2C1 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LHX5Q9H2C1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LHX5Q9H2C1 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.3■□□□□ 0.68
LHX5Q9H2C1 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.3■□□□□ 0.68
LHX5Q9H2C1 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LHX5Q9H2C1 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.3■□□□□ 0.68
LHX5Q9H2C1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
LHX5Q9H2C1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LHX5Q9H2C1 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LHX5Q9H2C1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
LHX5Q9H2C1 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LHX5Q9H2C1 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LHX5Q9H2C1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LHX5Q9H2C1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LHX5Q9H2C1 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.29■□□□□ 0.68
LHX5Q9H2C1 KRT89P-201ENST00000620027 1478 ntBASIC19.29■□□□□ 0.68
LHX5Q9H2C1 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LHX5Q9H2C1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LHX5Q9H2C1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LHX5Q9H2C1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LHX5Q9H2C1 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LHX5Q9H2C1 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LHX5Q9H2C1 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LHX5Q9H2C1 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.29■□□□□ 0.68
LHX5Q9H2C1 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LHX5Q9H2C1 AC092647.4-201ENST00000457211 535 ntBASIC19.29■□□□□ 0.68
LHX5Q9H2C1 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.29■□□□□ 0.68
LHX5Q9H2C1 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.29■□□□□ 0.68
LHX5Q9H2C1 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.29■□□□□ 0.68
LHX5Q9H2C1 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.29■□□□□ 0.68
LHX5Q9H2C1 AL136038.4-201ENST00000603606 1261 ntBASIC19.29■□□□□ 0.68
LHX5Q9H2C1 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LHX5Q9H2C1 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
LHX5Q9H2C1 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LHX5Q9H2C1 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LHX5Q9H2C1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LHX5Q9H2C1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LHX5Q9H2C1 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LHX5Q9H2C1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
LHX5Q9H2C1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.29■□□□□ 0.68
LHX5Q9H2C1 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LHX5Q9H2C1 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LHX5Q9H2C1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LHX5Q9H2C1 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LHX5Q9H2C1 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LHX5Q9H2C1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.28■□□□□ 0.68
LHX5Q9H2C1 REXO1L9P-201ENST00000604264 2108 ntBASIC19.28■□□□□ 0.68
LHX5Q9H2C1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LHX5Q9H2C1 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LHX5Q9H2C1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LHX5Q9H2C1 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LHX5Q9H2C1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LHX5Q9H2C1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
LHX5Q9H2C1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LHX5Q9H2C1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LHX5Q9H2C1 FAM8A6P-201ENST00000407496 1135 ntBASIC19.28■□□□□ 0.68
LHX5Q9H2C1 KRT18P38-201ENST00000449496 1282 ntBASIC19.28■□□□□ 0.68
LHX5Q9H2C1 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.28■□□□□ 0.68
LHX5Q9H2C1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LHX5Q9H2C1 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.28■□□□□ 0.68
LHX5Q9H2C1 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.28■□□□□ 0.68
LHX5Q9H2C1 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.28■□□□□ 0.68
LHX5Q9H2C1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LHX5Q9H2C1 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LHX5Q9H2C1 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LHX5Q9H2C1 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LHX5Q9H2C1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LHX5Q9H2C1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
LHX5Q9H2C1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LHX5Q9H2C1 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms