Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
POLR2J3Q9H1A7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
POLR2J3Q9H1A7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
POLR2J3Q9H1A7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
POLR2J3Q9H1A7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
POLR2J3Q9H1A7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
POLR2J3Q9H1A7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
POLR2J3Q9H1A7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
POLR2J3Q9H1A7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.96■□□□□ 0.3
POLR2J3Q9H1A7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.96■□□□□ 0.3
POLR2J3Q9H1A7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
POLR2J3Q9H1A7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
POLR2J3Q9H1A7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
POLR2J3Q9H1A7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
POLR2J3Q9H1A7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
POLR2J3Q9H1A7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
POLR2J3Q9H1A7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLR2J3Q9H1A7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLR2J3Q9H1A7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLR2J3Q9H1A7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
POLR2J3Q9H1A7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
POLR2J3Q9H1A7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.95■□□□□ 0.3
POLR2J3Q9H1A7 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.95■□□□□ 0.3
POLR2J3Q9H1A7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
POLR2J3Q9H1A7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLR2J3Q9H1A7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLR2J3Q9H1A7 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLR2J3Q9H1A7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
POLR2J3Q9H1A7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.95■□□□□ 0.3
POLR2J3Q9H1A7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.95■□□□□ 0.3
POLR2J3Q9H1A7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.95■□□□□ 0.3
POLR2J3Q9H1A7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.95■□□□□ 0.3
POLR2J3Q9H1A7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
POLR2J3Q9H1A7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLR2J3Q9H1A7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
POLR2J3Q9H1A7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLR2J3Q9H1A7 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.95■□□□□ 0.3
POLR2J3Q9H1A7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.95■□□□□ 0.3
POLR2J3Q9H1A7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
POLR2J3Q9H1A7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
POLR2J3Q9H1A7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLR2J3Q9H1A7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLR2J3Q9H1A7 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.95■□□□□ 0.3
POLR2J3Q9H1A7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
POLR2J3Q9H1A7 REXO1L9P-201ENST00000604264 2108 ntBASIC16.94■□□□□ 0.3
POLR2J3Q9H1A7 LINC00896-202ENST00000609602 2128 ntBASIC16.94■□□□□ 0.3
POLR2J3Q9H1A7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
POLR2J3Q9H1A7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
POLR2J3Q9H1A7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
POLR2J3Q9H1A7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
POLR2J3Q9H1A7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
POLR2J3Q9H1A7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.94■□□□□ 0.3
POLR2J3Q9H1A7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.94■□□□□ 0.3
POLR2J3Q9H1A7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
POLR2J3Q9H1A7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.94■□□□□ 0.3
POLR2J3Q9H1A7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.94■□□□□ 0.3
POLR2J3Q9H1A7 KRT18P29-201ENST00000397031 1267 ntBASIC16.94■□□□□ 0.3
POLR2J3Q9H1A7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.94■□□□□ 0.3
POLR2J3Q9H1A7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
POLR2J3Q9H1A7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.94■□□□□ 0.3
POLR2J3Q9H1A7 AC012618.2-201ENST00000428058 849 ntBASIC16.94■□□□□ 0.3
POLR2J3Q9H1A7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.94■□□□□ 0.3
POLR2J3Q9H1A7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.94■□□□□ 0.3
POLR2J3Q9H1A7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.94■□□□□ 0.3
POLR2J3Q9H1A7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
POLR2J3Q9H1A7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
POLR2J3Q9H1A7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
POLR2J3Q9H1A7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
POLR2J3Q9H1A7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
POLR2J3Q9H1A7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
POLR2J3Q9H1A7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
POLR2J3Q9H1A7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
POLR2J3Q9H1A7 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.94■□□□□ 0.3
POLR2J3Q9H1A7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.94■□□□□ 0.3
POLR2J3Q9H1A7 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
POLR2J3Q9H1A7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.94■□□□□ 0.3
POLR2J3Q9H1A7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.93■□□□□ 0.3
POLR2J3Q9H1A7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR2J3Q9H1A7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR2J3Q9H1A7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR2J3Q9H1A7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
POLR2J3Q9H1A7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.93■□□□□ 0.3
POLR2J3Q9H1A7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR2J3Q9H1A7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR2J3Q9H1A7 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR2J3Q9H1A7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
POLR2J3Q9H1A7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
POLR2J3Q9H1A7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR2J3Q9H1A7 UBE2SP1-201ENST00000450587 669 ntBASIC16.93■□□□□ 0.3
POLR2J3Q9H1A7 SLC25A1P4-201ENST00000567977 778 ntBASIC16.93■□□□□ 0.3
POLR2J3Q9H1A7 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.93■□□□□ 0.3
POLR2J3Q9H1A7 MIR3180-5-201ENST00000583743 153 ntBASIC16.93■□□□□ 0.3
POLR2J3Q9H1A7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.93■□□□□ 0.3
POLR2J3Q9H1A7 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.93■□□□□ 0.3
POLR2J3Q9H1A7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR2J3Q9H1A7 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR2J3Q9H1A7 GPAT2P1-201ENST00000444924 1672 ntBASIC16.93■□□□□ 0.3
POLR2J3Q9H1A7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.93■□□□□ 0.3
POLR2J3Q9H1A7 KRT8P7-201ENST00000533003 1432 ntBASIC16.93■□□□□ 0.3
POLR2J3Q9H1A7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms