Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF38Q9H0F5 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF38Q9H0F5 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF38Q9H0F5 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF38Q9H0F5 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF38Q9H0F5 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF38Q9H0F5 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF38Q9H0F5 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.94■□□□□ 0.62
RNF38Q9H0F5 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF38Q9H0F5 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.94■□□□□ 0.62
RNF38Q9H0F5 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.94■□□□□ 0.62
RNF38Q9H0F5 Z69720.1-201ENST00000601483 472 ntBASIC18.94■□□□□ 0.62
RNF38Q9H0F5 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF38Q9H0F5 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF38Q9H0F5 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF38Q9H0F5 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF38Q9H0F5 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
RNF38Q9H0F5 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF38Q9H0F5 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF38Q9H0F5 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF38Q9H0F5 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF38Q9H0F5 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF38Q9H0F5 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF38Q9H0F5 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF38Q9H0F5 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF38Q9H0F5 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF38Q9H0F5 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF38Q9H0F5 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF38Q9H0F5 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF38Q9H0F5 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF38Q9H0F5 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
RNF38Q9H0F5 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF38Q9H0F5 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.93■□□□□ 0.62
RNF38Q9H0F5 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF38Q9H0F5 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF38Q9H0F5 KRT18P31-201ENST00000506277 1292 ntBASIC18.93■□□□□ 0.62
RNF38Q9H0F5 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RNF38Q9H0F5 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF38Q9H0F5 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.93■□□□□ 0.62
RNF38Q9H0F5 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RNF38Q9H0F5 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF38Q9H0F5 IFNL4P1-201ENST00000607083 540 ntBASIC18.93■□□□□ 0.62
RNF38Q9H0F5 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.93■□□□□ 0.62
RNF38Q9H0F5 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF38Q9H0F5 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
RNF38Q9H0F5 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF38Q9H0F5 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF38Q9H0F5 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF38Q9H0F5 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF38Q9H0F5 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.92■□□□□ 0.62
RNF38Q9H0F5 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.92■□□□□ 0.62
RNF38Q9H0F5 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.92■□□□□ 0.62
RNF38Q9H0F5 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.92■□□□□ 0.62
RNF38Q9H0F5 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.92■□□□□ 0.62
RNF38Q9H0F5 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.92■□□□□ 0.62
RNF38Q9H0F5 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.92■□□□□ 0.62
RNF38Q9H0F5 AC091304.2-201ENST00000564639 760 ntBASIC18.92■□□□□ 0.62
RNF38Q9H0F5 AC111152.3-201ENST00000569699 673 ntBASIC18.92■□□□□ 0.62
RNF38Q9H0F5 AC011840.4-201ENST00000578471 627 ntBASIC18.92■□□□□ 0.62
RNF38Q9H0F5 AC099336.1-202ENST00000602961 463 ntBASIC18.92■□□□□ 0.62
RNF38Q9H0F5 AC138894.3-201ENST00000603787 634 ntBASIC18.92■□□□□ 0.62
RNF38Q9H0F5 AL353801.3-201ENST00000609898 542 ntBASIC18.92■□□□□ 0.62
RNF38Q9H0F5 AL121772.3-201ENST00000610840 674 ntBASIC18.92■□□□□ 0.62
RNF38Q9H0F5 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF38Q9H0F5 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RNF38Q9H0F5 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF38Q9H0F5 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF38Q9H0F5 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF38Q9H0F5 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF38Q9H0F5 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.92■□□□□ 0.62
RNF38Q9H0F5 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF38Q9H0F5 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF38Q9H0F5 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF38Q9H0F5 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF38Q9H0F5 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.91■□□□□ 0.62
RNF38Q9H0F5 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF38Q9H0F5 AC126763.1-201ENST00000552015 2118 ntBASIC18.91■□□□□ 0.62
RNF38Q9H0F5 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF38Q9H0F5 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF38Q9H0F5 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF38Q9H0F5 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF38Q9H0F5 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RNF38Q9H0F5 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RNF38Q9H0F5 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF38Q9H0F5 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF38Q9H0F5 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
RNF38Q9H0F5 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF38Q9H0F5 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.91■□□□□ 0.62
RNF38Q9H0F5 EMBP1-201ENST00000458200 901 ntBASIC18.91■□□□□ 0.62
RNF38Q9H0F5 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF38Q9H0F5 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF38Q9H0F5 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF38Q9H0F5 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.91■□□□□ 0.62
RNF38Q9H0F5 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF38Q9H0F5 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.91■□□□□ 0.62
RNF38Q9H0F5 AC008687.5-201ENST00000593746 558 ntBASIC18.91■□□□□ 0.62
RNF38Q9H0F5 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF38Q9H0F5 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.91■□□□□ 0.62
RNF38Q9H0F5 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF38Q9H0F5 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms