Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RSPO3Q9BXY4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RSPO3Q9BXY4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RSPO3Q9BXY4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RSPO3Q9BXY4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RSPO3Q9BXY4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RSPO3Q9BXY4 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RSPO3Q9BXY4 MIR718-201ENST00000390190 70 ntBASIC16.82■□□□□ 0.28
RSPO3Q9BXY4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.82■□□□□ 0.28
RSPO3Q9BXY4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RSPO3Q9BXY4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.82■□□□□ 0.28
RSPO3Q9BXY4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.82■□□□□ 0.28
RSPO3Q9BXY4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
RSPO3Q9BXY4 MIR4497-201ENST00000583208 89 ntBASIC16.82■□□□□ 0.28
RSPO3Q9BXY4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RSPO3Q9BXY4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.82■□□□□ 0.28
RSPO3Q9BXY4 AC116562.4-202ENST00000641738 218 ntBASIC16.82■□□□□ 0.28
RSPO3Q9BXY4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RSPO3Q9BXY4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RSPO3Q9BXY4 FZD10-202ENST00000539839 3282 ntBASIC16.82■□□□□ 0.28
RSPO3Q9BXY4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RSPO3Q9BXY4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RSPO3Q9BXY4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
RSPO3Q9BXY4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RSPO3Q9BXY4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RSPO3Q9BXY4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RSPO3Q9BXY4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
RSPO3Q9BXY4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
RSPO3Q9BXY4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RSPO3Q9BXY4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RSPO3Q9BXY4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RSPO3Q9BXY4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.81■□□□□ 0.28
RSPO3Q9BXY4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RSPO3Q9BXY4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RSPO3Q9BXY4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RSPO3Q9BXY4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RSPO3Q9BXY4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RSPO3Q9BXY4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.81■□□□□ 0.28
RSPO3Q9BXY4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RSPO3Q9BXY4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RSPO3Q9BXY4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.81■□□□□ 0.28
RSPO3Q9BXY4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.81■□□□□ 0.28
RSPO3Q9BXY4 CCR12P-201ENST00000446203 998 ntBASIC16.81■□□□□ 0.28
RSPO3Q9BXY4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.81■□□□□ 0.28
RSPO3Q9BXY4 EGLN1P1-201ENST00000531623 762 ntBASIC16.81■□□□□ 0.28
RSPO3Q9BXY4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.81■□□□□ 0.28
RSPO3Q9BXY4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.81■□□□□ 0.28
RSPO3Q9BXY4 AC010653.2-201ENST00000623505 997 ntBASIC16.81■□□□□ 0.28
RSPO3Q9BXY4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.81■□□□□ 0.28
RSPO3Q9BXY4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RSPO3Q9BXY4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RSPO3Q9BXY4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RSPO3Q9BXY4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RSPO3Q9BXY4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RSPO3Q9BXY4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO3Q9BXY4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RSPO3Q9BXY4 AC100803.2-201ENST00000562459 1963 ntBASIC16.8■□□□□ 0.28
RSPO3Q9BXY4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO3Q9BXY4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO3Q9BXY4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO3Q9BXY4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO3Q9BXY4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO3Q9BXY4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.8■□□□□ 0.28
RSPO3Q9BXY4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO3Q9BXY4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO3Q9BXY4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO3Q9BXY4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RSPO3Q9BXY4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.8■□□□□ 0.28
RSPO3Q9BXY4 AC010240.3-201ENST00000607688 395 ntBASIC16.8■□□□□ 0.28
RSPO3Q9BXY4 AC066615.1-201ENST00000640911 628 ntBASIC16.8■□□□□ 0.28
RSPO3Q9BXY4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.8■□□□□ 0.28
RSPO3Q9BXY4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO3Q9BXY4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO3Q9BXY4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO3Q9BXY4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO3Q9BXY4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO3Q9BXY4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO3Q9BXY4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO3Q9BXY4 KRT18P55-202ENST00000578578 1546 ntBASIC16.8■□□□□ 0.28
RSPO3Q9BXY4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO3Q9BXY4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RSPO3Q9BXY4 AC108860.2-201ENST00000562760 2183 ntBASIC16.79■□□□□ 0.28
RSPO3Q9BXY4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
RSPO3Q9BXY4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RSPO3Q9BXY4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RSPO3Q9BXY4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RSPO3Q9BXY4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RSPO3Q9BXY4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
RSPO3Q9BXY4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.79■□□□□ 0.28
RSPO3Q9BXY4 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.79■□□□□ 0.28
RSPO3Q9BXY4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.79■□□□□ 0.28
RSPO3Q9BXY4 ECEL1P2-202ENST00000465689 757 ntBASIC16.79■□□□□ 0.28
RSPO3Q9BXY4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
RSPO3Q9BXY4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.79■□□□□ 0.28
RSPO3Q9BXY4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.79■□□□□ 0.28
RSPO3Q9BXY4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.79■□□□□ 0.28
RSPO3Q9BXY4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RSPO3Q9BXY4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.79■□□□□ 0.28
RSPO3Q9BXY4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RSPO3Q9BXY4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms