Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LITAFQ99732 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
LITAFQ99732 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LITAFQ99732 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC12.19□□□□□ -0.46
LITAFQ99732 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
LITAFQ99732 SP100-208ENST00000427101 1922 ntTSL 2 BASIC12.19□□□□□ -0.46
LITAFQ99732 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC12.19□□□□□ -0.46
LITAFQ99732 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
LITAFQ99732 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LITAFQ99732 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC12.19□□□□□ -0.46
LITAFQ99732 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC12.19□□□□□ -0.46
LITAFQ99732 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
LITAFQ99732 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC12.19□□□□□ -0.46
LITAFQ99732 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
LITAFQ99732 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC12.19□□□□□ -0.46
LITAFQ99732 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
LITAFQ99732 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC12.19□□□□□ -0.46
LITAFQ99732 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LITAFQ99732 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LITAFQ99732 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC12.19□□□□□ -0.46
LITAFQ99732 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LITAFQ99732 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LITAFQ99732 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
LITAFQ99732 PEMT-206ENST00000435340 960 ntTSL 5 BASIC12.19□□□□□ -0.46
LITAFQ99732 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC12.19□□□□□ -0.46
LITAFQ99732 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LITAFQ99732 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC12.19□□□□□ -0.46
LITAFQ99732 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC12.19□□□□□ -0.46
LITAFQ99732 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC12.19□□□□□ -0.46
LITAFQ99732 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC12.19□□□□□ -0.46
LITAFQ99732 OR10C1-204ENST00000622521 1039 ntBASIC12.19□□□□□ -0.46
LITAFQ99732 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC12.19□□□□□ -0.46
LITAFQ99732 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LITAFQ99732 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
LITAFQ99732 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LITAFQ99732 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
LITAFQ99732 PCDHA1-201ENST00000378133 2726 ntBASIC12.19□□□□□ -0.46
LITAFQ99732 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LITAFQ99732 ABR-203ENST00000536794 2213 ntTSL 2 BASIC12.19□□□□□ -0.46
LITAFQ99732 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
LITAFQ99732 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
LITAFQ99732 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LITAFQ99732 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LITAFQ99732 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LITAFQ99732 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LITAFQ99732 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
LITAFQ99732 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LITAFQ99732 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
LITAFQ99732 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LITAFQ99732 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC12.19□□□□□ -0.46
LITAFQ99732 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC12.19□□□□□ -0.46
LITAFQ99732 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LITAFQ99732 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LITAFQ99732 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC12.18□□□□□ -0.46
LITAFQ99732 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC12.18□□□□□ -0.46
LITAFQ99732 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC12.18□□□□□ -0.46
LITAFQ99732 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LITAFQ99732 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
LITAFQ99732 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LITAFQ99732 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC12.18□□□□□ -0.46
LITAFQ99732 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LITAFQ99732 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC12.18□□□□□ -0.46
LITAFQ99732 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LITAFQ99732 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
LITAFQ99732 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LITAFQ99732 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LITAFQ99732 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC12.18□□□□□ -0.46
LITAFQ99732 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LITAFQ99732 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC12.18□□□□□ -0.46
LITAFQ99732 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LITAFQ99732 APTR-203ENST00000430801 583 ntTSL 5 BASIC12.18□□□□□ -0.46
LITAFQ99732 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
LITAFQ99732 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
LITAFQ99732 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC12.18□□□□□ -0.46
LITAFQ99732 RHOD-202ENST00000532559 538 ntTSL 3 BASIC12.18□□□□□ -0.46
LITAFQ99732 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC12.18□□□□□ -0.46
LITAFQ99732 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC12.18□□□□□ -0.46
LITAFQ99732 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LITAFQ99732 AC142381.2-201ENST00000566120 298 ntBASIC12.18□□□□□ -0.46
LITAFQ99732 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
LITAFQ99732 AL121832.2-201ENST00000610979 668 ntBASIC12.18□□□□□ -0.46
LITAFQ99732 AC006557.6-201ENST00000623071 864 ntBASIC12.18□□□□□ -0.46
LITAFQ99732 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC12.18□□□□□ -0.46
LITAFQ99732 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
LITAFQ99732 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
LITAFQ99732 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC12.18□□□□□ -0.46
LITAFQ99732 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LITAFQ99732 AL513477.1-201ENST00000602865 2407 ntBASIC12.18□□□□□ -0.46
LITAFQ99732 BCL2-203ENST00000589955 5011 ntBASIC12.18□□□□□ -0.46
LITAFQ99732 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LITAFQ99732 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LITAFQ99732 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LITAFQ99732 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LITAFQ99732 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC12.18□□□□□ -0.46
LITAFQ99732 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
LITAFQ99732 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LITAFQ99732 CRK-204ENST00000574295 1391 ntTSL 5 BASIC12.18□□□□□ -0.46
LITAFQ99732 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
LITAFQ99732 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC12.17□□□□□ -0.46
LITAFQ99732 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms