Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DUX3Q96PT4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
DUX3Q96PT4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DUX3Q96PT4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DUX3Q96PT4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC14.25□□□□□ -0.13
DUX3Q96PT4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DUX3Q96PT4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DUX3Q96PT4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.25□□□□□ -0.13
DUX3Q96PT4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DUX3Q96PT4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
DUX3Q96PT4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DUX3Q96PT4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.25□□□□□ -0.13
DUX3Q96PT4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
DUX3Q96PT4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
DUX3Q96PT4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC14.25□□□□□ -0.13
DUX3Q96PT4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.25□□□□□ -0.13
DUX3Q96PT4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DUX3Q96PT4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
DUX3Q96PT4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
DUX3Q96PT4 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DUX3Q96PT4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DUX3Q96PT4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DUX3Q96PT4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.25□□□□□ -0.13
DUX3Q96PT4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DUX3Q96PT4 NFYC-AS1-201ENST00000606277 1687 ntBASIC14.25□□□□□ -0.13
DUX3Q96PT4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DUX3Q96PT4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DUX3Q96PT4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
DUX3Q96PT4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DUX3Q96PT4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.25□□□□□ -0.13
DUX3Q96PT4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DUX3Q96PT4 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
DUX3Q96PT4 HOXB1-202ENST00000577092 1414 ntBASIC14.24□□□□□ -0.13
DUX3Q96PT4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
DUX3Q96PT4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DUX3Q96PT4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC14.24□□□□□ -0.13
DUX3Q96PT4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.24□□□□□ -0.13
DUX3Q96PT4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DUX3Q96PT4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.24□□□□□ -0.13
DUX3Q96PT4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
DUX3Q96PT4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DUX3Q96PT4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
DUX3Q96PT4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.24□□□□□ -0.13
DUX3Q96PT4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.24□□□□□ -0.13
DUX3Q96PT4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DUX3Q96PT4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DUX3Q96PT4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.24□□□□□ -0.13
DUX3Q96PT4 AL121894.2-201ENST00000602977 491 ntBASIC14.24□□□□□ -0.13
DUX3Q96PT4 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
DUX3Q96PT4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.24□□□□□ -0.13
DUX3Q96PT4 CROCCP1-201ENST00000426910 5675 ntBASIC14.24□□□□□ -0.13
DUX3Q96PT4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DUX3Q96PT4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
DUX3Q96PT4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DUX3Q96PT4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.24□□□□□ -0.13
DUX3Q96PT4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DUX3Q96PT4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.24□□□□□ -0.13
DUX3Q96PT4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
DUX3Q96PT4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
DUX3Q96PT4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DUX3Q96PT4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DUX3Q96PT4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
DUX3Q96PT4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
DUX3Q96PT4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC14.24□□□□□ -0.13
DUX3Q96PT4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC14.24□□□□□ -0.13
DUX3Q96PT4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC14.24□□□□□ -0.13
DUX3Q96PT4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
DUX3Q96PT4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC14.23□□□□□ -0.13
DUX3Q96PT4 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DUX3Q96PT4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.23□□□□□ -0.13
DUX3Q96PT4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
DUX3Q96PT4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
DUX3Q96PT4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
DUX3Q96PT4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
DUX3Q96PT4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DUX3Q96PT4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
DUX3Q96PT4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC14.23□□□□□ -0.13
DUX3Q96PT4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DUX3Q96PT4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
DUX3Q96PT4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
DUX3Q96PT4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
DUX3Q96PT4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
DUX3Q96PT4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
DUX3Q96PT4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
DUX3Q96PT4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
DUX3Q96PT4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
DUX3Q96PT4 HLA-F-220ENST00000434407 884 ntBASIC14.23□□□□□ -0.13
DUX3Q96PT4 KRT18P48-201ENST00000434763 852 ntBASIC14.23□□□□□ -0.13
DUX3Q96PT4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.23□□□□□ -0.13
DUX3Q96PT4 BX276092.5-203ENST00000456199 560 ntBASIC14.23□□□□□ -0.13
DUX3Q96PT4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.23□□□□□ -0.13
DUX3Q96PT4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.23□□□□□ -0.13
DUX3Q96PT4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.23□□□□□ -0.13
DUX3Q96PT4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.23□□□□□ -0.13
DUX3Q96PT4 RNF126P1-202ENST00000569893 925 ntBASIC14.23□□□□□ -0.13
DUX3Q96PT4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
DUX3Q96PT4 CLEC4GP1-201ENST00000596555 870 ntBASIC14.23□□□□□ -0.13
DUX3Q96PT4 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.23□□□□□ -0.13
DUX3Q96PT4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
DUX3Q96PT4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms