Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SLC46A1Q96NT5 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC46A1Q96NT5 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC46A1Q96NT5 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC46A1Q96NT5 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC46A1Q96NT5 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.5■□□□□ 0.39
SLC46A1Q96NT5 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SLC46A1Q96NT5 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SLC46A1Q96NT5 FAM197Y8-203ENST00000450145 560 ntBASIC17.5■□□□□ 0.39
SLC46A1Q96NT5 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SLC46A1Q96NT5 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC46A1Q96NT5 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC46A1Q96NT5 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC46A1Q96NT5 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.5■□□□□ 0.39
SLC46A1Q96NT5 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.5■□□□□ 0.39
SLC46A1Q96NT5 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC46A1Q96NT5 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SLC46A1Q96NT5 TP73-AS1-207ENST00000624167 988 ntBASIC17.5■□□□□ 0.39
SLC46A1Q96NT5 AC083906.6-201ENST00000641366 219 ntBASIC17.5■□□□□ 0.39
SLC46A1Q96NT5 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC46A1Q96NT5 AC120498.9-201ENST00000339021 3867 ntBASIC17.5■□□□□ 0.39
SLC46A1Q96NT5 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC46A1Q96NT5 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SLC46A1Q96NT5 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC46A1Q96NT5 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC46A1Q96NT5 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC46A1Q96NT5 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC46A1Q96NT5 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC46A1Q96NT5 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC46A1Q96NT5 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SLC46A1Q96NT5 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC46A1Q96NT5 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SLC46A1Q96NT5 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC46A1Q96NT5 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC46A1Q96NT5 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC46A1Q96NT5 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SLC46A1Q96NT5 AC018445.3-201ENST00000624177 1945 ntBASIC17.49■□□□□ 0.39
SLC46A1Q96NT5 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SLC46A1Q96NT5 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC46A1Q96NT5 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.49■□□□□ 0.39
SLC46A1Q96NT5 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC46A1Q96NT5 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC46A1Q96NT5 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
SLC46A1Q96NT5 KRT18P13-201ENST00000400056 1290 ntBASIC17.49■□□□□ 0.39
SLC46A1Q96NT5 AC091607.1-201ENST00000490318 1060 ntBASIC17.49■□□□□ 0.39
SLC46A1Q96NT5 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.49■□□□□ 0.39
SLC46A1Q96NT5 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.49■□□□□ 0.39
SLC46A1Q96NT5 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.49■□□□□ 0.39
SLC46A1Q96NT5 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SLC46A1Q96NT5 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC46A1Q96NT5 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC46A1Q96NT5 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC46A1Q96NT5 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC46A1Q96NT5 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC46A1Q96NT5 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC46A1Q96NT5 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC46A1Q96NT5 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC46A1Q96NT5 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC46A1Q96NT5 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
SLC46A1Q96NT5 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC46A1Q96NT5 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC46A1Q96NT5 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SLC46A1Q96NT5 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC46A1Q96NT5 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.48■□□□□ 0.39
SLC46A1Q96NT5 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC46A1Q96NT5 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SLC46A1Q96NT5 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
SLC46A1Q96NT5 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC46A1Q96NT5 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC46A1Q96NT5 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC46A1Q96NT5 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.48■□□□□ 0.39
SLC46A1Q96NT5 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.48■□□□□ 0.39
SLC46A1Q96NT5 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC46A1Q96NT5 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.48■□□□□ 0.39
SLC46A1Q96NT5 AC009065.1-201ENST00000564055 1225 ntBASIC17.48■□□□□ 0.39
SLC46A1Q96NT5 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.48■□□□□ 0.39
SLC46A1Q96NT5 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.48■□□□□ 0.39
SLC46A1Q96NT5 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC46A1Q96NT5 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.48■□□□□ 0.39
SLC46A1Q96NT5 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SLC46A1Q96NT5 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SLC46A1Q96NT5 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SLC46A1Q96NT5 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
SLC46A1Q96NT5 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC46A1Q96NT5 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC46A1Q96NT5 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
SLC46A1Q96NT5 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC46A1Q96NT5 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC46A1Q96NT5 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC46A1Q96NT5 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC46A1Q96NT5 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC46A1Q96NT5 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC46A1Q96NT5 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.47■□□□□ 0.39
SLC46A1Q96NT5 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC46A1Q96NT5 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC46A1Q96NT5 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.47■□□□□ 0.39
SLC46A1Q96NT5 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.47■□□□□ 0.39
SLC46A1Q96NT5 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC46A1Q96NT5 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SLC46A1Q96NT5 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms