Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SIPA1Q96FS4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIPA1Q96FS4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.34■□□□□ 0.53
SIPA1Q96FS4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIPA1Q96FS4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.34■□□□□ 0.53
SIPA1Q96FS4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIPA1Q96FS4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIPA1Q96FS4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SIPA1Q96FS4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SIPA1Q96FS4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.34■□□□□ 0.53
SIPA1Q96FS4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.34■□□□□ 0.53
SIPA1Q96FS4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIPA1Q96FS4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SIPA1Q96FS4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIPA1Q96FS4 MYLKP1-201ENST00000509077 1580 ntBASIC18.34■□□□□ 0.53
SIPA1Q96FS4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SIPA1Q96FS4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SIPA1Q96FS4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SIPA1Q96FS4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
SIPA1Q96FS4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SIPA1Q96FS4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SIPA1Q96FS4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SIPA1Q96FS4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SIPA1Q96FS4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SIPA1Q96FS4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.33■□□□□ 0.52
SIPA1Q96FS4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.33■□□□□ 0.52
SIPA1Q96FS4 SAPCD2P3-201ENST00000455031 850 ntBASIC18.33■□□□□ 0.52
SIPA1Q96FS4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SIPA1Q96FS4 AL662844.1-201ENST00000546340 181 ntBASIC18.33■□□□□ 0.52
SIPA1Q96FS4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.33■□□□□ 0.52
SIPA1Q96FS4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SIPA1Q96FS4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
SIPA1Q96FS4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SIPA1Q96FS4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.33■□□□□ 0.52
SIPA1Q96FS4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.33■□□□□ 0.52
SIPA1Q96FS4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SIPA1Q96FS4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.33■□□□□ 0.52
SIPA1Q96FS4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.32■□□□□ 0.52
SIPA1Q96FS4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIPA1Q96FS4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIPA1Q96FS4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SIPA1Q96FS4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIPA1Q96FS4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.32■□□□□ 0.52
SIPA1Q96FS4 TSPY12P-201ENST00000421279 868 ntBASIC18.32■□□□□ 0.52
SIPA1Q96FS4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
SIPA1Q96FS4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.32■□□□□ 0.52
SIPA1Q96FS4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.32■□□□□ 0.52
SIPA1Q96FS4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
SIPA1Q96FS4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.32■□□□□ 0.52
SIPA1Q96FS4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIPA1Q96FS4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.32■□□□□ 0.52
SIPA1Q96FS4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SIPA1Q96FS4 REXO1L6P-202ENST00000619970 1078 ntBASIC18.32■□□□□ 0.52
SIPA1Q96FS4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SIPA1Q96FS4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIPA1Q96FS4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SIPA1Q96FS4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIPA1Q96FS4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIPA1Q96FS4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SIPA1Q96FS4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIPA1Q96FS4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.31■□□□□ 0.52
SIPA1Q96FS4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIPA1Q96FS4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
SIPA1Q96FS4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SIPA1Q96FS4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SIPA1Q96FS4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIPA1Q96FS4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIPA1Q96FS4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SIPA1Q96FS4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SIPA1Q96FS4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIPA1Q96FS4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SIPA1Q96FS4 AKR1C7P-201ENST00000305623 895 ntBASIC18.31■□□□□ 0.52
SIPA1Q96FS4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SIPA1Q96FS4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.31■□□□□ 0.52
SIPA1Q96FS4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIPA1Q96FS4 AP000347.1-202ENST00000435868 847 ntBASIC18.31■□□□□ 0.52
SIPA1Q96FS4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.31■□□□□ 0.52
SIPA1Q96FS4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.31■□□□□ 0.52
SIPA1Q96FS4 AC079776.4-201ENST00000511039 504 ntBASIC18.31■□□□□ 0.52
SIPA1Q96FS4 AC106795.1-205ENST00000512851 1056 ntBASIC18.31■□□□□ 0.52
SIPA1Q96FS4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.31■□□□□ 0.52
SIPA1Q96FS4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.31■□□□□ 0.52
SIPA1Q96FS4 SLC25A6P4-201ENST00000586535 553 ntBASIC18.31■□□□□ 0.52
SIPA1Q96FS4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.31■□□□□ 0.52
SIPA1Q96FS4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.31■□□□□ 0.52
SIPA1Q96FS4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.31■□□□□ 0.52
SIPA1Q96FS4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIPA1Q96FS4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIPA1Q96FS4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.31■□□□□ 0.52
SIPA1Q96FS4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.31■□□□□ 0.52
SIPA1Q96FS4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SIPA1Q96FS4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIPA1Q96FS4 SDHAP2-201ENST00000455183 2001 ntBASIC18.3■□□□□ 0.52
SIPA1Q96FS4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SIPA1Q96FS4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIPA1Q96FS4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.3■□□□□ 0.52
SIPA1Q96FS4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.3■□□□□ 0.52
SIPA1Q96FS4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIPA1Q96FS4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIPA1Q96FS4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms