Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.68■□□□□ 0.58
RTP4Q96DX8 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.68■□□□□ 0.58
RTP4Q96DX8 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTP4Q96DX8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTP4Q96DX8 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RTP4Q96DX8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTP4Q96DX8 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
RTP4Q96DX8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RTP4Q96DX8 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.68■□□□□ 0.58
RTP4Q96DX8 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.68■□□□□ 0.58
RTP4Q96DX8 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTP4Q96DX8 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.68■□□□□ 0.58
RTP4Q96DX8 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
RTP4Q96DX8 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTP4Q96DX8 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTP4Q96DX8 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTP4Q96DX8 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.67■□□□□ 0.58
RTP4Q96DX8 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RTP4Q96DX8 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTP4Q96DX8 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTP4Q96DX8 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTP4Q96DX8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTP4Q96DX8 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTP4Q96DX8 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTP4Q96DX8 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.67■□□□□ 0.58
RTP4Q96DX8 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RTP4Q96DX8 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RTP4Q96DX8 AC128688.1-201ENST00000487626 519 ntBASIC18.67■□□□□ 0.58
RTP4Q96DX8 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.67■□□□□ 0.58
RTP4Q96DX8 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.67■□□□□ 0.58
RTP4Q96DX8 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RTP4Q96DX8 FAM87A-204ENST00000613235 858 ntBASIC18.67■□□□□ 0.58
RTP4Q96DX8 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.67■□□□□ 0.58
RTP4Q96DX8 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RTP4Q96DX8 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RTP4Q96DX8 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RTP4Q96DX8 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTP4Q96DX8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RTP4Q96DX8 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTP4Q96DX8 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTP4Q96DX8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RTP4Q96DX8 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
RTP4Q96DX8 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.66■□□□□ 0.58
RTP4Q96DX8 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.66■□□□□ 0.58
RTP4Q96DX8 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTP4Q96DX8 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RTP4Q96DX8 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
RTP4Q96DX8 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTP4Q96DX8 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTP4Q96DX8 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.66■□□□□ 0.58
RTP4Q96DX8 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RTP4Q96DX8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTP4Q96DX8 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.66■□□□□ 0.58
RTP4Q96DX8 KRT18P55-202ENST00000578578 1546 ntBASIC18.66■□□□□ 0.58
RTP4Q96DX8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
RTP4Q96DX8 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTP4Q96DX8 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.66■□□□□ 0.58
RTP4Q96DX8 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.66■□□□□ 0.58
RTP4Q96DX8 KRT18P35-201ENST00000510488 1269 ntBASIC18.66■□□□□ 0.58
RTP4Q96DX8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.66■□□□□ 0.58
RTP4Q96DX8 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.66■□□□□ 0.58
RTP4Q96DX8 AL049597.2-201ENST00000565575 961 ntBASIC18.66■□□□□ 0.58
RTP4Q96DX8 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
RTP4Q96DX8 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.66■□□□□ 0.58
RTP4Q96DX8 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.66■□□□□ 0.58
RTP4Q96DX8 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.66■□□□□ 0.58
RTP4Q96DX8 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RTP4Q96DX8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RTP4Q96DX8 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RTP4Q96DX8 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTP4Q96DX8 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTP4Q96DX8 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTP4Q96DX8 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RTP4Q96DX8 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.66■□□□□ 0.58
RTP4Q96DX8 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.65■□□□□ 0.58
RTP4Q96DX8 LINC00896-202ENST00000609602 2128 ntBASIC18.65■□□□□ 0.58
RTP4Q96DX8 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTP4Q96DX8 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.65■□□□□ 0.58
RTP4Q96DX8 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.65■□□□□ 0.58
RTP4Q96DX8 AC006116.8-202ENST00000587620 1550 ntBASIC18.65■□□□□ 0.58
RTP4Q96DX8 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTP4Q96DX8 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTP4Q96DX8 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.65■□□□□ 0.58
RTP4Q96DX8 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RTP4Q96DX8 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.65■□□□□ 0.58
RTP4Q96DX8 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTP4Q96DX8 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTP4Q96DX8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RTP4Q96DX8 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RTP4Q96DX8 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTP4Q96DX8 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RTP4Q96DX8 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTP4Q96DX8 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTP4Q96DX8 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTP4Q96DX8 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RTP4Q96DX8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RTP4Q96DX8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTP4Q96DX8 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTP4Q96DX8 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTP4Q96DX8 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms