Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TRIM43Q96BQ3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.82■□□□□ 0.76
TRIM43Q96BQ3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM43Q96BQ3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRIM43Q96BQ3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
TRIM43Q96BQ3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM43Q96BQ3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM43Q96BQ3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.81■□□□□ 0.76
TRIM43Q96BQ3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.81■□□□□ 0.76
TRIM43Q96BQ3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TRIM43Q96BQ3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
TRIM43Q96BQ3 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.81■□□□□ 0.76
TRIM43Q96BQ3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM43Q96BQ3 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM43Q96BQ3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.81■□□□□ 0.76
TRIM43Q96BQ3 SNHG9-202ENST00000564014 471 ntBASIC19.81■□□□□ 0.76
TRIM43Q96BQ3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM43Q96BQ3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.81■□□□□ 0.76
TRIM43Q96BQ3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.81■□□□□ 0.76
TRIM43Q96BQ3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM43Q96BQ3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.81■□□□□ 0.76
TRIM43Q96BQ3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
TRIM43Q96BQ3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM43Q96BQ3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM43Q96BQ3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM43Q96BQ3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM43Q96BQ3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM43Q96BQ3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM43Q96BQ3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
TRIM43Q96BQ3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM43Q96BQ3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM43Q96BQ3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM43Q96BQ3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM43Q96BQ3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
TRIM43Q96BQ3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
TRIM43Q96BQ3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM43Q96BQ3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM43Q96BQ3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM43Q96BQ3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
TRIM43Q96BQ3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.8■□□□□ 0.76
TRIM43Q96BQ3 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM43Q96BQ3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM43Q96BQ3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM43Q96BQ3 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TRIM43Q96BQ3 MIR4469-201ENST00000583919 79 ntBASIC19.8■□□□□ 0.76
TRIM43Q96BQ3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.8■□□□□ 0.76
TRIM43Q96BQ3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM43Q96BQ3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.8■□□□□ 0.76
TRIM43Q96BQ3 LINC00602-201ENST00000629776 2065 ntBASIC19.8■□□□□ 0.76
TRIM43Q96BQ3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM43Q96BQ3 AC125437.2-201ENST00000625180 2167 ntBASIC19.8■□□□□ 0.76
TRIM43Q96BQ3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM43Q96BQ3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM43Q96BQ3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM43Q96BQ3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM43Q96BQ3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM43Q96BQ3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM43Q96BQ3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM43Q96BQ3 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM43Q96BQ3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM43Q96BQ3 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM43Q96BQ3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM43Q96BQ3 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.79■□□□□ 0.76
TRIM43Q96BQ3 KRT18P27-201ENST00000427733 1299 ntBASIC19.79■□□□□ 0.76
TRIM43Q96BQ3 HTR5BP-201ENST00000430851 1154 ntBASIC19.79■□□□□ 0.76
TRIM43Q96BQ3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM43Q96BQ3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM43Q96BQ3 BX005266.1-201ENST00000473402 457 ntBASIC19.79■□□□□ 0.76
TRIM43Q96BQ3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM43Q96BQ3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM43Q96BQ3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.79■□□□□ 0.76
TRIM43Q96BQ3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
TRIM43Q96BQ3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM43Q96BQ3 SDHAP2-201ENST00000455183 2001 ntBASIC19.79■□□□□ 0.76
TRIM43Q96BQ3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM43Q96BQ3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM43Q96BQ3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM43Q96BQ3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM43Q96BQ3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM43Q96BQ3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM43Q96BQ3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM43Q96BQ3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM43Q96BQ3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM43Q96BQ3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
TRIM43Q96BQ3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM43Q96BQ3 FAM8A3P-201ENST00000427218 844 ntBASIC19.78■□□□□ 0.76
TRIM43Q96BQ3 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM43Q96BQ3 ALG1L5P-201ENST00000482043 771 ntBASIC19.78■□□□□ 0.76
TRIM43Q96BQ3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
TRIM43Q96BQ3 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.78■□□□□ 0.76
TRIM43Q96BQ3 AC092364.2-202ENST00000597012 1073 ntBASIC19.78■□□□□ 0.76
TRIM43Q96BQ3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.78■□□□□ 0.76
TRIM43Q96BQ3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM43Q96BQ3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM43Q96BQ3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM43Q96BQ3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.78■□□□□ 0.76
TRIM43Q96BQ3 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM43Q96BQ3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM43Q96BQ3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM43Q96BQ3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms