Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CNKSR1Q969H4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CNKSR1Q969H4 AP002414.3-201ENST00000589352 1468 ntBASIC22.34■■□□□ 1.17
CNKSR1Q969H4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CNKSR1Q969H4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CNKSR1Q969H4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
CNKSR1Q969H4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
CNKSR1Q969H4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CNKSR1Q969H4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC22.34■■□□□ 1.17
CNKSR1Q969H4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CNKSR1Q969H4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CNKSR1Q969H4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CNKSR1Q969H4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CNKSR1Q969H4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CNKSR1Q969H4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CNKSR1Q969H4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CNKSR1Q969H4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
CNKSR1Q969H4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
CNKSR1Q969H4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CNKSR1Q969H4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC22.34■■□□□ 1.17
CNKSR1Q969H4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC22.34■■□□□ 1.17
CNKSR1Q969H4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC22.34■■□□□ 1.17
CNKSR1Q969H4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC22.34■■□□□ 1.17
CNKSR1Q969H4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CNKSR1Q969H4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC22.34■■□□□ 1.17
CNKSR1Q969H4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC22.34■■□□□ 1.17
CNKSR1Q969H4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CNKSR1Q969H4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC22.34■■□□□ 1.17
CNKSR1Q969H4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC22.34■■□□□ 1.17
CNKSR1Q969H4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
CNKSR1Q969H4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC22.34■■□□□ 1.17
CNKSR1Q969H4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
CNKSR1Q969H4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CNKSR1Q969H4 LINC00602-201ENST00000629776 2065 ntBASIC22.34■■□□□ 1.17
CNKSR1Q969H4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CNKSR1Q969H4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC22.33■■□□□ 1.17
CNKSR1Q969H4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC22.33■■□□□ 1.17
CNKSR1Q969H4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CNKSR1Q969H4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
CNKSR1Q969H4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC22.33■■□□□ 1.17
CNKSR1Q969H4 LAGE3P1-201ENST00000425356 484 ntBASIC22.33■■□□□ 1.17
CNKSR1Q969H4 AC007967.2-201ENST00000432613 625 ntBASIC22.33■■□□□ 1.17
CNKSR1Q969H4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CNKSR1Q969H4 KRT18P65-201ENST00000439811 1286 ntBASIC22.33■■□□□ 1.17
CNKSR1Q969H4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC22.33■■□□□ 1.17
CNKSR1Q969H4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC22.33■■□□□ 1.17
CNKSR1Q969H4 RPS29-206ENST00000557111 488 ntTSL 2 BASIC22.33■■□□□ 1.17
CNKSR1Q969H4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC22.33■■□□□ 1.17
CNKSR1Q969H4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
CNKSR1Q969H4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CNKSR1Q969H4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CNKSR1Q969H4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CNKSR1Q969H4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CNKSR1Q969H4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CNKSR1Q969H4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC22.32■■□□□ 1.16
CNKSR1Q969H4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CNKSR1Q969H4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC22.32■■□□□ 1.16
CNKSR1Q969H4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC22.32■■□□□ 1.16
CNKSR1Q969H4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC22.32■■□□□ 1.16
CNKSR1Q969H4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
CNKSR1Q969H4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CNKSR1Q969H4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC22.32■■□□□ 1.16
CNKSR1Q969H4 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC22.32■■□□□ 1.16
CNKSR1Q969H4 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CNKSR1Q969H4 MTDHP5-201ENST00000598980 586 ntBASIC22.32■■□□□ 1.16
CNKSR1Q969H4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
CNKSR1Q969H4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CNKSR1Q969H4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CNKSR1Q969H4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
CNKSR1Q969H4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CNKSR1Q969H4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
CNKSR1Q969H4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
CNKSR1Q969H4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
CNKSR1Q969H4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CNKSR1Q969H4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC22.32■■□□□ 1.16
CNKSR1Q969H4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
CNKSR1Q969H4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CNKSR1Q969H4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CNKSR1Q969H4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CNKSR1Q969H4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC22.31■■□□□ 1.16
CNKSR1Q969H4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC22.31■■□□□ 1.16
CNKSR1Q969H4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CNKSR1Q969H4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC22.31■■□□□ 1.16
CNKSR1Q969H4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CNKSR1Q969H4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC22.31■■□□□ 1.16
CNKSR1Q969H4 AC009947.1-201ENST00000444350 727 ntBASIC22.31■■□□□ 1.16
CNKSR1Q969H4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC22.31■■□□□ 1.16
CNKSR1Q969H4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC22.31■■□□□ 1.16
CNKSR1Q969H4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CNKSR1Q969H4 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC22.31■■□□□ 1.16
CNKSR1Q969H4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC22.31■■□□□ 1.16
CNKSR1Q969H4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC22.31■■□□□ 1.16
CNKSR1Q969H4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC22.31■■□□□ 1.16
CNKSR1Q969H4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
CNKSR1Q969H4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CNKSR1Q969H4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
CNKSR1Q969H4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CNKSR1Q969H4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CNKSR1Q969H4 MYLKP1-201ENST00000509077 1580 ntBASIC22.3■■□□□ 1.16
CNKSR1Q969H4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms