Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
BRF1Q92994 LINC01126-201ENST00000623515 1646 ntBASIC21.57■■□□□ 1.04
BRF1Q92994 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
BRF1Q92994 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
BRF1Q92994 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BRF1Q92994 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BRF1Q92994 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BRF1Q92994 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
BRF1Q92994 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BRF1Q92994 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
BRF1Q92994 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.56■■□□□ 1.04
BRF1Q92994 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
BRF1Q92994 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BRF1Q92994 AL096828.2-201ENST00000567259 1965 ntBASIC21.56■■□□□ 1.04
BRF1Q92994 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
BRF1Q92994 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
BRF1Q92994 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BRF1Q92994 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
BRF1Q92994 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BRF1Q92994 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.56■■□□□ 1.04
BRF1Q92994 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.56■■□□□ 1.04
BRF1Q92994 AC211429.1-201ENST00000415277 523 ntBASIC21.56■■□□□ 1.04
BRF1Q92994 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.56■■□□□ 1.04
BRF1Q92994 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.56■■□□□ 1.04
BRF1Q92994 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
BRF1Q92994 AL023973.1-201ENST00000624619 620 ntBASIC21.56■■□□□ 1.04
BRF1Q92994 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.56■■□□□ 1.04
BRF1Q92994 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
BRF1Q92994 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BRF1Q92994 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
BRF1Q92994 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.56■■□□□ 1.04
BRF1Q92994 CD276-203ENST00000537340 2439 ntTSL 2 BASIC21.56■■□□□ 1.04
BRF1Q92994 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.56■■□□□ 1.04
BRF1Q92994 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BRF1Q92994 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
BRF1Q92994 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
BRF1Q92994 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
BRF1Q92994 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
BRF1Q92994 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
BRF1Q92994 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
BRF1Q92994 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BRF1Q92994 AC026471.1-201ENST00000564629 3026 ntBASIC21.55■■□□□ 1.04
BRF1Q92994 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
BRF1Q92994 TERF1P1-201ENST00000311003 1181 ntBASIC21.55■■□□□ 1.04
BRF1Q92994 AC113347.1-201ENST00000413321 391 ntBASIC21.55■■□□□ 1.04
BRF1Q92994 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.55■■□□□ 1.04
BRF1Q92994 GCSHP2-201ENST00000560971 527 ntBASIC21.55■■□□□ 1.04
BRF1Q92994 AC009065.1-201ENST00000564055 1225 ntBASIC21.55■■□□□ 1.04
BRF1Q92994 MIR3917-201ENST00000580971 93 ntBASIC21.55■■□□□ 1.04
BRF1Q92994 AC005363.2-201ENST00000618631 242 ntBASIC21.55■■□□□ 1.04
BRF1Q92994 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BRF1Q92994 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BRF1Q92994 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BRF1Q92994 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
BRF1Q92994 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BRF1Q92994 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.55■■□□□ 1.04
BRF1Q92994 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BRF1Q92994 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.55■■□□□ 1.04
BRF1Q92994 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
BRF1Q92994 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
BRF1Q92994 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BRF1Q92994 NOC2LP2-201ENST00000407594 1944 ntBASIC21.55■■□□□ 1.04
BRF1Q92994 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
BRF1Q92994 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
BRF1Q92994 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
BRF1Q92994 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
BRF1Q92994 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
BRF1Q92994 AR-207ENST00000612010 3896 ntTSL 5 BASIC21.55■■□□□ 1.04
BRF1Q92994 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BRF1Q92994 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
BRF1Q92994 AL024508.2-201ENST00000607749 1894 ntBASIC21.54■■□□□ 1.04
BRF1Q92994 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
BRF1Q92994 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BRF1Q92994 LIN28AP1-201ENST00000429574 405 ntBASIC21.54■■□□□ 1.04
BRF1Q92994 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
BRF1Q92994 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.54■■□□□ 1.04
BRF1Q92994 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.54■■□□□ 1.04
BRF1Q92994 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
BRF1Q92994 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
BRF1Q92994 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
BRF1Q92994 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
BRF1Q92994 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
BRF1Q92994 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
BRF1Q92994 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21.54■■□□□ 1.04
BRF1Q92994 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
BRF1Q92994 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BRF1Q92994 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.54■■□□□ 1.04
BRF1Q92994 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BRF1Q92994 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
BRF1Q92994 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
BRF1Q92994 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BRF1Q92994 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BRF1Q92994 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.53■■□□□ 1.04
BRF1Q92994 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BRF1Q92994 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BRF1Q92994 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BRF1Q92994 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
BRF1Q92994 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
BRF1Q92994 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
BRF1Q92994 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms