Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 AC138028.4-201ENST00000564984 1845 ntBASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.45■□□□□ 0.06
RTN4IP1Q8WWV3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 AC093677.2-201ENST00000600169 1863 ntBASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 AC012313.1-201ENST00000593393 3059 ntBASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 AC139713.2-201ENST00000641328 2723 ntBASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 PRSS44-201ENST00000515154 1146 ntBASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 MIR6786-201ENST00000616843 113 ntBASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 AC113410.3-201ENST00000623366 203 ntBASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 AP006294.2-201ENST00000641667 209 ntBASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 FSCN1P1-201ENST00000568912 1481 ntBASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RTN4IP1Q8WWV3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 KRT8P11-201ENST00000409686 1436 ntBASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 MIR718-201ENST00000390190 70 ntBASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 B3GAT3P1-201ENST00000471720 806 ntBASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 AC008550.1-201ENST00000511500 884 ntBASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 NUDT16P1-203ENST00000513809 620 ntBASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 Z99916.2-201ENST00000604037 246 ntBASIC15.43■□□□□ 0.06
RTN4IP1Q8WWV3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms