Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
STAG1Q8WVM7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.54■■□□□ 1.04
STAG1Q8WVM7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.54■■□□□ 1.04
STAG1Q8WVM7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.54■■□□□ 1.04
STAG1Q8WVM7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
STAG1Q8WVM7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.54■■□□□ 1.04
STAG1Q8WVM7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
STAG1Q8WVM7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
STAG1Q8WVM7 Z83836.1-201ENST00000624605 1642 ntBASIC21.54■■□□□ 1.04
STAG1Q8WVM7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
STAG1Q8WVM7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
STAG1Q8WVM7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
STAG1Q8WVM7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.53■■□□□ 1.04
STAG1Q8WVM7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
STAG1Q8WVM7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.53■■□□□ 1.04
STAG1Q8WVM7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
STAG1Q8WVM7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
STAG1Q8WVM7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.53■■□□□ 1.04
STAG1Q8WVM7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.53■■□□□ 1.04
STAG1Q8WVM7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC21.53■■□□□ 1.04
STAG1Q8WVM7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
STAG1Q8WVM7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC21.53■■□□□ 1.04
STAG1Q8WVM7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.53■■□□□ 1.04
STAG1Q8WVM7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.53■■□□□ 1.04
STAG1Q8WVM7 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
STAG1Q8WVM7 KRT18P56-201ENST00000507275 550 ntBASIC21.53■■□□□ 1.04
STAG1Q8WVM7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.53■■□□□ 1.04
STAG1Q8WVM7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
STAG1Q8WVM7 AC004263.2-201ENST00000617183 678 ntBASIC21.53■■□□□ 1.04
STAG1Q8WVM7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
STAG1Q8WVM7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
STAG1Q8WVM7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
STAG1Q8WVM7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
STAG1Q8WVM7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
STAG1Q8WVM7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.53■■□□□ 1.04
STAG1Q8WVM7 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.53■■□□□ 1.04
STAG1Q8WVM7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
STAG1Q8WVM7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
STAG1Q8WVM7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
STAG1Q8WVM7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
STAG1Q8WVM7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
STAG1Q8WVM7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
STAG1Q8WVM7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
STAG1Q8WVM7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
STAG1Q8WVM7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
STAG1Q8WVM7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
STAG1Q8WVM7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
STAG1Q8WVM7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
STAG1Q8WVM7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
STAG1Q8WVM7 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
STAG1Q8WVM7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
STAG1Q8WVM7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.52■■□□□ 1.04
STAG1Q8WVM7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.52■■□□□ 1.04
STAG1Q8WVM7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21.52■■□□□ 1.04
STAG1Q8WVM7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
STAG1Q8WVM7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.52■■□□□ 1.04
STAG1Q8WVM7 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.52■■□□□ 1.04
STAG1Q8WVM7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
STAG1Q8WVM7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
STAG1Q8WVM7 AC135776.1-201ENST00000319817 2481 ntBASIC21.52■■□□□ 1.04
STAG1Q8WVM7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
STAG1Q8WVM7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.52■■□□□ 1.04
STAG1Q8WVM7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
STAG1Q8WVM7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
STAG1Q8WVM7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
STAG1Q8WVM7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
STAG1Q8WVM7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
STAG1Q8WVM7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.51■■□□□ 1.03
STAG1Q8WVM7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
STAG1Q8WVM7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
STAG1Q8WVM7 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
STAG1Q8WVM7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
STAG1Q8WVM7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
STAG1Q8WVM7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.51■■□□□ 1.03
STAG1Q8WVM7 TSPY22P-201ENST00000427496 604 ntBASIC21.51■■□□□ 1.03
STAG1Q8WVM7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC21.51■■□□□ 1.03
STAG1Q8WVM7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC21.51■■□□□ 1.03
STAG1Q8WVM7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.51■■□□□ 1.03
STAG1Q8WVM7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC21.51■■□□□ 1.03
STAG1Q8WVM7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
STAG1Q8WVM7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
STAG1Q8WVM7 LINC00167-201ENST00000530583 1419 ntBASIC21.51■■□□□ 1.03
STAG1Q8WVM7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
STAG1Q8WVM7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
STAG1Q8WVM7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
STAG1Q8WVM7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
STAG1Q8WVM7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
STAG1Q8WVM7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
STAG1Q8WVM7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
STAG1Q8WVM7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
STAG1Q8WVM7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.51■■□□□ 1.03
STAG1Q8WVM7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
STAG1Q8WVM7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
STAG1Q8WVM7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
STAG1Q8WVM7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
STAG1Q8WVM7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
STAG1Q8WVM7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
STAG1Q8WVM7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
STAG1Q8WVM7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
STAG1Q8WVM7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms