Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCLL1Q8TB92 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCLL1Q8TB92 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCLL1Q8TB92 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCLL1Q8TB92 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCLL1Q8TB92 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
HMGCLL1Q8TB92 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCLL1Q8TB92 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCLL1Q8TB92 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCLL1Q8TB92 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCLL1Q8TB92 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCLL1Q8TB92 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCLL1Q8TB92 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCLL1Q8TB92 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCLL1Q8TB92 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCLL1Q8TB92 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
HMGCLL1Q8TB92 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCLL1Q8TB92 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.97■□□□□ 0.47
HMGCLL1Q8TB92 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.97■□□□□ 0.47
HMGCLL1Q8TB92 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCLL1Q8TB92 AC134043.2-201ENST00000624206 2238 ntBASIC17.97■□□□□ 0.47
HMGCLL1Q8TB92 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.97■□□□□ 0.47
HMGCLL1Q8TB92 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCLL1Q8TB92 AC117947.1-201ENST00000427448 529 ntBASIC17.97■□□□□ 0.47
HMGCLL1Q8TB92 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.97■□□□□ 0.47
HMGCLL1Q8TB92 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.97■□□□□ 0.47
HMGCLL1Q8TB92 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.97■□□□□ 0.47
HMGCLL1Q8TB92 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.97■□□□□ 0.47
HMGCLL1Q8TB92 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
HMGCLL1Q8TB92 AC104390.1-201ENST00000555663 520 ntBASIC17.97■□□□□ 0.47
HMGCLL1Q8TB92 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.97■□□□□ 0.47
HMGCLL1Q8TB92 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.97■□□□□ 0.47
HMGCLL1Q8TB92 AC006011.2-201ENST00000621313 1158 ntBASIC17.97■□□□□ 0.47
HMGCLL1Q8TB92 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCLL1Q8TB92 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.97■□□□□ 0.47
HMGCLL1Q8TB92 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCLL1Q8TB92 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCLL1Q8TB92 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.97■□□□□ 0.47
HMGCLL1Q8TB92 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.97■□□□□ 0.47
HMGCLL1Q8TB92 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HMGCLL1Q8TB92 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 TMPOP1-202ENST00000424642 1267 ntBASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 SEC1P-202ENST00000473944 940 ntBASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 YBX1P2-201ENST00000489612 999 ntBASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 KRT8P50-201ENST00000562022 1438 ntBASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.96■□□□□ 0.47
HMGCLL1Q8TB92 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
HMGCLL1Q8TB92 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
HMGCLL1Q8TB92 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGCLL1Q8TB92 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.95■□□□□ 0.46
HMGCLL1Q8TB92 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.95■□□□□ 0.46
HMGCLL1Q8TB92 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
HMGCLL1Q8TB92 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HMGCLL1Q8TB92 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.95■□□□□ 0.46
HMGCLL1Q8TB92 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.95■□□□□ 0.46
HMGCLL1Q8TB92 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
HMGCLL1Q8TB92 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
HMGCLL1Q8TB92 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGCLL1Q8TB92 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.95■□□□□ 0.46
HMGCLL1Q8TB92 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.95■□□□□ 0.46
HMGCLL1Q8TB92 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.95■□□□□ 0.46
HMGCLL1Q8TB92 AC139887.4-201ENST00000607877 719 ntBASIC17.95■□□□□ 0.46
HMGCLL1Q8TB92 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.95■□□□□ 0.46
HMGCLL1Q8TB92 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
HMGCLL1Q8TB92 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.95■□□□□ 0.46
HMGCLL1Q8TB92 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGCLL1Q8TB92 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms