Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 AC040169.1-201ENST00000565382 521 ntBASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 NIFKP4-201ENST00000567275 1192 ntBASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 LINC01006-201ENST00000333319 2292 ntBASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNIP1Q8TAD8 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNIP1Q8TAD8 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNIP1Q8TAD8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.23■□□□□ 0.35
SNIP1Q8TAD8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNIP1Q8TAD8 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNIP1Q8TAD8 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNIP1Q8TAD8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNIP1Q8TAD8 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.23■□□□□ 0.35
SNIP1Q8TAD8 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.23■□□□□ 0.35
SNIP1Q8TAD8 KRT18P3-201ENST00000451602 1288 ntBASIC17.23■□□□□ 0.35
SNIP1Q8TAD8 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.23■□□□□ 0.35
SNIP1Q8TAD8 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.23■□□□□ 0.35
SNIP1Q8TAD8 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.23■□□□□ 0.35
SNIP1Q8TAD8 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
SNIP1Q8TAD8 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.23■□□□□ 0.35
SNIP1Q8TAD8 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.23■□□□□ 0.35
SNIP1Q8TAD8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNIP1Q8TAD8 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNIP1Q8TAD8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNIP1Q8TAD8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SNIP1Q8TAD8 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SNIP1Q8TAD8 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.23■□□□□ 0.35
SNIP1Q8TAD8 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SNIP1Q8TAD8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.23■□□□□ 0.35
SNIP1Q8TAD8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SNIP1Q8TAD8 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.23■□□□□ 0.35
SNIP1Q8TAD8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNIP1Q8TAD8 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.22■□□□□ 0.35
SNIP1Q8TAD8 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNIP1Q8TAD8 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNIP1Q8TAD8 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNIP1Q8TAD8 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNIP1Q8TAD8 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNIP1Q8TAD8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNIP1Q8TAD8 HLA-J-201ENST00000462773 1622 ntBASIC17.22■□□□□ 0.35
SNIP1Q8TAD8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNIP1Q8TAD8 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNIP1Q8TAD8 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.22■□□□□ 0.35
SNIP1Q8TAD8 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNIP1Q8TAD8 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SNIP1Q8TAD8 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.22■□□□□ 0.35
SNIP1Q8TAD8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SNIP1Q8TAD8 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.22■□□□□ 0.35
SNIP1Q8TAD8 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.22■□□□□ 0.35
SNIP1Q8TAD8 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.22■□□□□ 0.35
SNIP1Q8TAD8 RPS8P6-201ENST00000426177 609 ntBASIC17.22■□□□□ 0.35
SNIP1Q8TAD8 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.22■□□□□ 0.35
SNIP1Q8TAD8 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNIP1Q8TAD8 Z83851.2-201ENST00000609564 659 ntBASIC17.22■□□□□ 0.35
SNIP1Q8TAD8 AP001269.4-201ENST00000609611 512 ntBASIC17.22■□□□□ 0.35
SNIP1Q8TAD8 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNIP1Q8TAD8 TP73-AS1-210ENST00000637775 1455 ntBASIC17.22■□□□□ 0.35
SNIP1Q8TAD8 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNIP1Q8TAD8 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNIP1Q8TAD8 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SNIP1Q8TAD8 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SNIP1Q8TAD8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SNIP1Q8TAD8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SNIP1Q8TAD8 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SNIP1Q8TAD8 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SNIP1Q8TAD8 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.21■□□□□ 0.35
SNIP1Q8TAD8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNIP1Q8TAD8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNIP1Q8TAD8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
SNIP1Q8TAD8 Z82202.1-201ENST00000623446 1880 ntBASIC17.21■□□□□ 0.35
SNIP1Q8TAD8 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNIP1Q8TAD8 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SNIP1Q8TAD8 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
SNIP1Q8TAD8 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNIP1Q8TAD8 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNIP1Q8TAD8 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNIP1Q8TAD8 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.21■□□□□ 0.35
SNIP1Q8TAD8 AC112482.1-201ENST00000492080 688 ntBASIC17.21■□□□□ 0.35
SNIP1Q8TAD8 AC021087.4-201ENST00000563761 564 ntBASIC17.21■□□□□ 0.35
SNIP1Q8TAD8 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SNIP1Q8TAD8 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.21■□□□□ 0.35
SNIP1Q8TAD8 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.21■□□□□ 0.35
SNIP1Q8TAD8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms