Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
BEST2Q8NFU1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST2Q8NFU1 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
BEST2Q8NFU1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST2Q8NFU1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST2Q8NFU1 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.65■□□□□ 0.74
BEST2Q8NFU1 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST2Q8NFU1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST2Q8NFU1 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
BEST2Q8NFU1 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.65■□□□□ 0.74
BEST2Q8NFU1 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.65■□□□□ 0.74
BEST2Q8NFU1 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.65■□□□□ 0.74
BEST2Q8NFU1 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST2Q8NFU1 AC090616.6-201ENST00000582640 721 ntBASIC19.65■□□□□ 0.74
BEST2Q8NFU1 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
BEST2Q8NFU1 AC004263.2-201ENST00000617183 678 ntBASIC19.65■□□□□ 0.74
BEST2Q8NFU1 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.65■□□□□ 0.74
BEST2Q8NFU1 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.65■□□□□ 0.74
BEST2Q8NFU1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST2Q8NFU1 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST2Q8NFU1 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BEST2Q8NFU1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST2Q8NFU1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.65■□□□□ 0.74
BEST2Q8NFU1 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
BEST2Q8NFU1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
BEST2Q8NFU1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST2Q8NFU1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BEST2Q8NFU1 LINC01126-201ENST00000623515 1646 ntBASIC19.65■□□□□ 0.74
BEST2Q8NFU1 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BEST2Q8NFU1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.65■□□□□ 0.74
BEST2Q8NFU1 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST2Q8NFU1 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST2Q8NFU1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.65■□□□□ 0.74
BEST2Q8NFU1 AC087289.5-201ENST00000586076 3175 ntBASIC19.65■□□□□ 0.74
BEST2Q8NFU1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
BEST2Q8NFU1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
BEST2Q8NFU1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
BEST2Q8NFU1 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
BEST2Q8NFU1 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
BEST2Q8NFU1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BEST2Q8NFU1 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
BEST2Q8NFU1 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.64■□□□□ 0.73
BEST2Q8NFU1 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.64■□□□□ 0.73
BEST2Q8NFU1 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
BEST2Q8NFU1 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.64■□□□□ 0.73
BEST2Q8NFU1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BEST2Q8NFU1 AP002383.4-201ENST00000442518 975 ntBASIC19.64■□□□□ 0.73
BEST2Q8NFU1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.64■□□□□ 0.73
BEST2Q8NFU1 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.64■□□□□ 0.73
BEST2Q8NFU1 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.64■□□□□ 0.73
BEST2Q8NFU1 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.64■□□□□ 0.73
BEST2Q8NFU1 CLEC4GP1-201ENST00000596555 870 ntBASIC19.64■□□□□ 0.73
BEST2Q8NFU1 AC092119.3-201ENST00000612618 583 ntBASIC19.64■□□□□ 0.73
BEST2Q8NFU1 KRT18P1-202ENST00000452408 1331 ntBASIC19.64■□□□□ 0.73
BEST2Q8NFU1 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BEST2Q8NFU1 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.64■□□□□ 0.73
BEST2Q8NFU1 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BEST2Q8NFU1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BEST2Q8NFU1 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BEST2Q8NFU1 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
BEST2Q8NFU1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.64■□□□□ 0.73
BEST2Q8NFU1 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.64■□□□□ 0.73
BEST2Q8NFU1 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
BEST2Q8NFU1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BEST2Q8NFU1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BEST2Q8NFU1 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BEST2Q8NFU1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
BEST2Q8NFU1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BEST2Q8NFU1 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BEST2Q8NFU1 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BEST2Q8NFU1 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BEST2Q8NFU1 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.63■□□□□ 0.73
BEST2Q8NFU1 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BEST2Q8NFU1 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BEST2Q8NFU1 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.63■□□□□ 0.73
BEST2Q8NFU1 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BEST2Q8NFU1 GUSBP12-201ENST00000513727 720 ntBASIC19.63■□□□□ 0.73
BEST2Q8NFU1 MIR3180-1-201ENST00000580374 94 ntBASIC19.63■□□□□ 0.73
BEST2Q8NFU1 MIR3180-3-201ENST00000584616 94 ntBASIC19.63■□□□□ 0.73
BEST2Q8NFU1 AP002414.4-201ENST00000589764 1148 ntBASIC19.63■□□□□ 0.73
BEST2Q8NFU1 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BEST2Q8NFU1 IGHV3-41-201ENST00000613121 348 ntBASIC19.63■□□□□ 0.73
BEST2Q8NFU1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
BEST2Q8NFU1 WIZP1-201ENST00000531444 2299 ntBASIC19.63■□□□□ 0.73
BEST2Q8NFU1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
BEST2Q8NFU1 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
BEST2Q8NFU1 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BEST2Q8NFU1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
BEST2Q8NFU1 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
BEST2Q8NFU1 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BEST2Q8NFU1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.62■□□□□ 0.73
BEST2Q8NFU1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BEST2Q8NFU1 AC138932.1-201ENST00000534164 6830 ntBASIC19.62■□□□□ 0.73
BEST2Q8NFU1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
BEST2Q8NFU1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BEST2Q8NFU1 BCL2-203ENST00000589955 5011 ntBASIC19.62■□□□□ 0.73
BEST2Q8NFU1 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
BEST2Q8NFU1 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
BEST2Q8NFU1 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BEST2Q8NFU1 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms