Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NUP43Q8NFH3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.16■□□□□ 0.34
NUP43Q8NFH3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.16■□□□□ 0.34
NUP43Q8NFH3 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NUP43Q8NFH3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NUP43Q8NFH3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.16■□□□□ 0.34
NUP43Q8NFH3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.16■□□□□ 0.34
NUP43Q8NFH3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NUP43Q8NFH3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NUP43Q8NFH3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NUP43Q8NFH3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NUP43Q8NFH3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.16■□□□□ 0.34
NUP43Q8NFH3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.16■□□□□ 0.34
NUP43Q8NFH3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 MIR3180-4-201ENST00000582223 153 ntBASIC17.15■□□□□ 0.34
NUP43Q8NFH3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 AC010240.3-201ENST00000607688 395 ntBASIC17.15■□□□□ 0.34
NUP43Q8NFH3 AC024243.1-201ENST00000609234 778 ntBASIC17.15■□□□□ 0.34
NUP43Q8NFH3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
NUP43Q8NFH3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.14■□□□□ 0.34
NUP43Q8NFH3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NUP43Q8NFH3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NUP43Q8NFH3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.14■□□□□ 0.33
NUP43Q8NFH3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NUP43Q8NFH3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NUP43Q8NFH3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
NUP43Q8NFH3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NUP43Q8NFH3 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
NUP43Q8NFH3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.14■□□□□ 0.33
NUP43Q8NFH3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.14■□□□□ 0.33
NUP43Q8NFH3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.14■□□□□ 0.33
NUP43Q8NFH3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NUP43Q8NFH3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.14■□□□□ 0.33
NUP43Q8NFH3 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.14■□□□□ 0.33
NUP43Q8NFH3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.14■□□□□ 0.33
NUP43Q8NFH3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.14■□□□□ 0.33
NUP43Q8NFH3 NEK4P2-201ENST00000580004 1012 ntBASIC17.14■□□□□ 0.33
NUP43Q8NFH3 AC145285.6-201ENST00000604632 637 ntBASIC17.14■□□□□ 0.33
NUP43Q8NFH3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
NUP43Q8NFH3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NUP43Q8NFH3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NUP43Q8NFH3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.14■□□□□ 0.33
NUP43Q8NFH3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NUP43Q8NFH3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.14■□□□□ 0.33
NUP43Q8NFH3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NUP43Q8NFH3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NUP43Q8NFH3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.14■□□□□ 0.33
NUP43Q8NFH3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.14■□□□□ 0.33
NUP43Q8NFH3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
NUP43Q8NFH3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
NUP43Q8NFH3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NUP43Q8NFH3 REXO1L9P-201ENST00000604264 2108 ntBASIC17.14■□□□□ 0.33
NUP43Q8NFH3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
NUP43Q8NFH3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
NUP43Q8NFH3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
NUP43Q8NFH3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
NUP43Q8NFH3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NUP43Q8NFH3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NUP43Q8NFH3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NUP43Q8NFH3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms