Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.49■□□□□ 0.39
SRFBP1Q8NEF9 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
SRFBP1Q8NEF9 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SRFBP1Q8NEF9 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.49■□□□□ 0.39
SRFBP1Q8NEF9 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.49■□□□□ 0.39
SRFBP1Q8NEF9 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SRFBP1Q8NEF9 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SRFBP1Q8NEF9 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRFBP1Q8NEF9 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SRFBP1Q8NEF9 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRFBP1Q8NEF9 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SRFBP1Q8NEF9 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.48■□□□□ 0.39
SRFBP1Q8NEF9 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.48■□□□□ 0.39
SRFBP1Q8NEF9 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SRFBP1Q8NEF9 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
SRFBP1Q8NEF9 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SRFBP1Q8NEF9 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SRFBP1Q8NEF9 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SRFBP1Q8NEF9 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SRFBP1Q8NEF9 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SRFBP1Q8NEF9 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SRFBP1Q8NEF9 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.48■□□□□ 0.39
SRFBP1Q8NEF9 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.48■□□□□ 0.39
SRFBP1Q8NEF9 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SRFBP1Q8NEF9 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SRFBP1Q8NEF9 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SRFBP1Q8NEF9 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.48■□□□□ 0.39
SRFBP1Q8NEF9 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SRFBP1Q8NEF9 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SRFBP1Q8NEF9 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.48■□□□□ 0.39
SRFBP1Q8NEF9 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.48■□□□□ 0.39
SRFBP1Q8NEF9 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.48■□□□□ 0.39
SRFBP1Q8NEF9 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.48■□□□□ 0.39
SRFBP1Q8NEF9 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.48■□□□□ 0.39
SRFBP1Q8NEF9 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SRFBP1Q8NEF9 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SRFBP1Q8NEF9 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SRFBP1Q8NEF9 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SRFBP1Q8NEF9 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SRFBP1Q8NEF9 AC104581.1-202ENST00000635932 2618 ntBASIC17.48■□□□□ 0.39
SRFBP1Q8NEF9 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.48■□□□□ 0.39
SRFBP1Q8NEF9 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SRFBP1Q8NEF9 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRFBP1Q8NEF9 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
SRFBP1Q8NEF9 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SRFBP1Q8NEF9 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRFBP1Q8NEF9 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRFBP1Q8NEF9 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRFBP1Q8NEF9 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRFBP1Q8NEF9 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.47■□□□□ 0.39
SRFBP1Q8NEF9 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRFBP1Q8NEF9 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.47■□□□□ 0.39
SRFBP1Q8NEF9 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SRFBP1Q8NEF9 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.47■□□□□ 0.39
SRFBP1Q8NEF9 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRFBP1Q8NEF9 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SRFBP1Q8NEF9 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRFBP1Q8NEF9 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.47■□□□□ 0.39
SRFBP1Q8NEF9 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.47■□□□□ 0.39
SRFBP1Q8NEF9 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.47■□□□□ 0.39
SRFBP1Q8NEF9 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.47■□□□□ 0.39
SRFBP1Q8NEF9 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.47■□□□□ 0.39
SRFBP1Q8NEF9 GCSHP2-201ENST00000560971 527 ntBASIC17.47■□□□□ 0.39
SRFBP1Q8NEF9 AL023973.1-201ENST00000624619 620 ntBASIC17.47■□□□□ 0.39
SRFBP1Q8NEF9 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.47■□□□□ 0.39
SRFBP1Q8NEF9 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SRFBP1Q8NEF9 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRFBP1Q8NEF9 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SRFBP1Q8NEF9 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRFBP1Q8NEF9 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.47■□□□□ 0.39
SRFBP1Q8NEF9 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRFBP1Q8NEF9 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SRFBP1Q8NEF9 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.47■□□□□ 0.39
SRFBP1Q8NEF9 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRFBP1Q8NEF9 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.47■□□□□ 0.39
SRFBP1Q8NEF9 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SRFBP1Q8NEF9 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.46■□□□□ 0.39
SRFBP1Q8NEF9 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SRFBP1Q8NEF9 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SRFBP1Q8NEF9 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRFBP1Q8NEF9 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRFBP1Q8NEF9 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRFBP1Q8NEF9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRFBP1Q8NEF9 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.46■□□□□ 0.39
SRFBP1Q8NEF9 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRFBP1Q8NEF9 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRFBP1Q8NEF9 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SRFBP1Q8NEF9 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRFBP1Q8NEF9 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.46■□□□□ 0.39
SRFBP1Q8NEF9 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.46■□□□□ 0.39
SRFBP1Q8NEF9 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRFBP1Q8NEF9 YBX1P2-201ENST00000489612 999 ntBASIC17.46■□□□□ 0.39
SRFBP1Q8NEF9 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.46■□□□□ 0.39
SRFBP1Q8NEF9 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRFBP1Q8NEF9 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SRFBP1Q8NEF9 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.46■□□□□ 0.39
SRFBP1Q8NEF9 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.46■□□□□ 0.39
SRFBP1Q8NEF9 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.46■□□□□ 0.39
SRFBP1Q8NEF9 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.46■□□□□ 0.39
SRFBP1Q8NEF9 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms