Protein–RNA interactions for Protein: Q8NDV7

TNRC6A, Trinucleotide repeat-containing gene 6A protein, humanhuman

Known RBP Predictions only

Length 1,962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6AQ8NDV7 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNRC6AQ8NDV7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNRC6AQ8NDV7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNRC6AQ8NDV7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.63■□□□□ 0.25
TNRC6AQ8NDV7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TNRC6AQ8NDV7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TNRC6AQ8NDV7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNRC6AQ8NDV7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNRC6AQ8NDV7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.63■□□□□ 0.25
TNRC6AQ8NDV7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNRC6AQ8NDV7 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.63■□□□□ 0.25
TNRC6AQ8NDV7 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.63■□□□□ 0.25
TNRC6AQ8NDV7 RPS2P1-201ENST00000434010 821 ntBASIC16.63■□□□□ 0.25
TNRC6AQ8NDV7 AC021087.4-201ENST00000563761 564 ntBASIC16.63■□□□□ 0.25
TNRC6AQ8NDV7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TNRC6AQ8NDV7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.63■□□□□ 0.25
TNRC6AQ8NDV7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.63■□□□□ 0.25
TNRC6AQ8NDV7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TNRC6AQ8NDV7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TNRC6AQ8NDV7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.63■□□□□ 0.25
TNRC6AQ8NDV7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNRC6AQ8NDV7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.63■□□□□ 0.25
TNRC6AQ8NDV7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TNRC6AQ8NDV7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TNRC6AQ8NDV7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TNRC6AQ8NDV7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNRC6AQ8NDV7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNRC6AQ8NDV7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TNRC6AQ8NDV7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNRC6AQ8NDV7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TNRC6AQ8NDV7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.62■□□□□ 0.25
TNRC6AQ8NDV7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNRC6AQ8NDV7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
TNRC6AQ8NDV7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.62■□□□□ 0.25
TNRC6AQ8NDV7 AC034105.1-201ENST00000563488 319 ntBASIC16.62■□□□□ 0.25
TNRC6AQ8NDV7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.62■□□□□ 0.25
TNRC6AQ8NDV7 AP001269.4-201ENST00000609611 512 ntBASIC16.62■□□□□ 0.25
TNRC6AQ8NDV7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TNRC6AQ8NDV7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNRC6AQ8NDV7 AL161938.1-201ENST00000569833 2180 ntBASIC16.62■□□□□ 0.25
TNRC6AQ8NDV7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TNRC6AQ8NDV7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.62■□□□□ 0.25
TNRC6AQ8NDV7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNRC6AQ8NDV7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNRC6AQ8NDV7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNRC6AQ8NDV7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TNRC6AQ8NDV7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNRC6AQ8NDV7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TNRC6AQ8NDV7 RCN1P2-201ENST00000398357 915 ntBASIC16.62■□□□□ 0.25
TNRC6AQ8NDV7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.62■□□□□ 0.25
TNRC6AQ8NDV7 AC132008.2-207ENST00000454517 770 ntBASIC16.62■□□□□ 0.25
TNRC6AQ8NDV7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.62■□□□□ 0.25
TNRC6AQ8NDV7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.62■□□□□ 0.25
TNRC6AQ8NDV7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.62■□□□□ 0.25
TNRC6AQ8NDV7 AC114341.1-201ENST00000618070 349 ntBASIC16.62■□□□□ 0.25
TNRC6AQ8NDV7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.62■□□□□ 0.25
TNRC6AQ8NDV7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.62■□□□□ 0.25
TNRC6AQ8NDV7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.62■□□□□ 0.25
TNRC6AQ8NDV7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.61■□□□□ 0.25
TNRC6AQ8NDV7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNRC6AQ8NDV7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TNRC6AQ8NDV7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.61■□□□□ 0.25
TNRC6AQ8NDV7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNRC6AQ8NDV7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNRC6AQ8NDV7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNRC6AQ8NDV7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TNRC6AQ8NDV7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNRC6AQ8NDV7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TNRC6AQ8NDV7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TNRC6AQ8NDV7 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNRC6AQ8NDV7 MIR149-201ENST00000384879 89 ntBASIC16.61■□□□□ 0.25
TNRC6AQ8NDV7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TNRC6AQ8NDV7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.61■□□□□ 0.25
TNRC6AQ8NDV7 AC116407.3-201ENST00000623905 1129 ntBASIC16.61■□□□□ 0.25
TNRC6AQ8NDV7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TNRC6AQ8NDV7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
TNRC6AQ8NDV7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNRC6AQ8NDV7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.61■□□□□ 0.25
TNRC6AQ8NDV7 TP73-AS1-210ENST00000637775 1455 ntBASIC16.61■□□□□ 0.25
TNRC6AQ8NDV7 AC005082.1-201ENST00000413042 2259 ntBASIC16.61■□□□□ 0.25
TNRC6AQ8NDV7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.61■□□□□ 0.25
TNRC6AQ8NDV7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TNRC6AQ8NDV7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.61■□□□□ 0.25
TNRC6AQ8NDV7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TNRC6AQ8NDV7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.61■□□□□ 0.25
TNRC6AQ8NDV7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TNRC6AQ8NDV7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNRC6AQ8NDV7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TNRC6AQ8NDV7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.6■□□□□ 0.25
TNRC6AQ8NDV7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.6■□□□□ 0.25
TNRC6AQ8NDV7 AC007967.2-201ENST00000432613 625 ntBASIC16.6■□□□□ 0.25
TNRC6AQ8NDV7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNRC6AQ8NDV7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.6■□□□□ 0.25
TNRC6AQ8NDV7 OR7E14P-202ENST00000530490 1290 ntBASIC16.6■□□□□ 0.25
TNRC6AQ8NDV7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.6■□□□□ 0.25
TNRC6AQ8NDV7 AL139424.1-201ENST00000607572 797 ntBASIC16.6■□□□□ 0.25
TNRC6AQ8NDV7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.6■□□□□ 0.25
TNRC6AQ8NDV7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.6■□□□□ 0.25
TNRC6AQ8NDV7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.6■□□□□ 0.25
TNRC6AQ8NDV7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms