Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDRT4Q8N9R6 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.03■□□□□ 0.32
CDRT4Q8N9R6 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.03■□□□□ 0.32
CDRT4Q8N9R6 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CDRT4Q8N9R6 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDRT4Q8N9R6 AL031432.5-201ENST00000641059 760 ntBASIC17.03■□□□□ 0.32
CDRT4Q8N9R6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.03■□□□□ 0.32
CDRT4Q8N9R6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.03■□□□□ 0.32
CDRT4Q8N9R6 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDRT4Q8N9R6 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.03■□□□□ 0.32
CDRT4Q8N9R6 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.03■□□□□ 0.32
CDRT4Q8N9R6 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDRT4Q8N9R6 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
CDRT4Q8N9R6 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDRT4Q8N9R6 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CDRT4Q8N9R6 HTR7P1-202ENST00000624664 4411 ntBASIC17.02■□□□□ 0.32
CDRT4Q8N9R6 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDRT4Q8N9R6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDRT4Q8N9R6 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDRT4Q8N9R6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDRT4Q8N9R6 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDRT4Q8N9R6 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDRT4Q8N9R6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.02■□□□□ 0.32
CDRT4Q8N9R6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.02■□□□□ 0.32
CDRT4Q8N9R6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDRT4Q8N9R6 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
CDRT4Q8N9R6 AL137013.1-201ENST00000432946 1228 ntBASIC17.02■□□□□ 0.32
CDRT4Q8N9R6 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.02■□□□□ 0.32
CDRT4Q8N9R6 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.02■□□□□ 0.32
CDRT4Q8N9R6 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CDRT4Q8N9R6 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CDRT4Q8N9R6 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.02■□□□□ 0.32
CDRT4Q8N9R6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.02■□□□□ 0.32
CDRT4Q8N9R6 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.02■□□□□ 0.32
CDRT4Q8N9R6 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.02■□□□□ 0.32
CDRT4Q8N9R6 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDRT4Q8N9R6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.02■□□□□ 0.32
CDRT4Q8N9R6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.02■□□□□ 0.32
CDRT4Q8N9R6 AC010203.1-204ENST00000548782 407 ntBASIC17.02■□□□□ 0.32
CDRT4Q8N9R6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDRT4Q8N9R6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.02■□□□□ 0.31
CDRT4Q8N9R6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDRT4Q8N9R6 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDRT4Q8N9R6 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDRT4Q8N9R6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDRT4Q8N9R6 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDRT4Q8N9R6 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDRT4Q8N9R6 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDRT4Q8N9R6 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDRT4Q8N9R6 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDRT4Q8N9R6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDRT4Q8N9R6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDRT4Q8N9R6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
CDRT4Q8N9R6 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDRT4Q8N9R6 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDRT4Q8N9R6 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.01■□□□□ 0.31
CDRT4Q8N9R6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDRT4Q8N9R6 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDRT4Q8N9R6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDRT4Q8N9R6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CDRT4Q8N9R6 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.01■□□□□ 0.31
CDRT4Q8N9R6 AC034232.1-201ENST00000506026 1064 ntBASIC17.01■□□□□ 0.31
CDRT4Q8N9R6 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CDRT4Q8N9R6 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.01■□□□□ 0.31
CDRT4Q8N9R6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.01■□□□□ 0.31
CDRT4Q8N9R6 AC140113.3-201ENST00000605663 199 ntBASIC17.01■□□□□ 0.31
CDRT4Q8N9R6 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.01■□□□□ 0.31
CDRT4Q8N9R6 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.01■□□□□ 0.31
CDRT4Q8N9R6 PHGDH-209ENST00000641074 1780 ntBASIC17.01■□□□□ 0.31
CDRT4Q8N9R6 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDRT4Q8N9R6 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CDRT4Q8N9R6 AC007613.1-201ENST00000572811 2597 ntBASIC17.01■□□□□ 0.31
CDRT4Q8N9R6 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.01■□□□□ 0.31
CDRT4Q8N9R6 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDRT4Q8N9R6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDRT4Q8N9R6 NOC2LP1-202ENST00000452600 2235 ntBASIC17.01■□□□□ 0.31
CDRT4Q8N9R6 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.01■□□□□ 0.31
CDRT4Q8N9R6 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDRT4Q8N9R6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CDRT4Q8N9R6 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDRT4Q8N9R6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDRT4Q8N9R6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDRT4Q8N9R6 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDRT4Q8N9R6 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDRT4Q8N9R6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDRT4Q8N9R6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDRT4Q8N9R6 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
CDRT4Q8N9R6 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDRT4Q8N9R6 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CDRT4Q8N9R6 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDRT4Q8N9R6 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDRT4Q8N9R6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17■□□□□ 0.31
CDRT4Q8N9R6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDRT4Q8N9R6 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17■□□□□ 0.31
CDRT4Q8N9R6 CD70-202ENST00000423145 881 ntTSL 2 BASIC17■□□□□ 0.31
CDRT4Q8N9R6 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CDRT4Q8N9R6 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17■□□□□ 0.31
CDRT4Q8N9R6 COX11P1-201ENST00000489116 835 ntBASIC17■□□□□ 0.31
CDRT4Q8N9R6 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17■□□□□ 0.31
CDRT4Q8N9R6 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms