Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.7■□□□□ 0.42
KRT78Q8N1N4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KRT78Q8N1N4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.69■□□□□ 0.42
KRT78Q8N1N4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.69■□□□□ 0.42
KRT78Q8N1N4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.69■□□□□ 0.42
KRT78Q8N1N4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT78Q8N1N4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT78Q8N1N4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT78Q8N1N4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT78Q8N1N4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT78Q8N1N4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT78Q8N1N4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.69■□□□□ 0.42
KRT78Q8N1N4 AC113347.1-201ENST00000413321 391 ntBASIC17.69■□□□□ 0.42
KRT78Q8N1N4 AL137013.1-201ENST00000432946 1228 ntBASIC17.69■□□□□ 0.42
KRT78Q8N1N4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.69■□□□□ 0.42
KRT78Q8N1N4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
KRT78Q8N1N4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.69■□□□□ 0.42
KRT78Q8N1N4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.69■□□□□ 0.42
KRT78Q8N1N4 LINC01023-201ENST00000606054 436 ntBASIC17.69■□□□□ 0.42
KRT78Q8N1N4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.69■□□□□ 0.42
KRT78Q8N1N4 AL138966.2-201ENST00000621997 464 ntBASIC17.69■□□□□ 0.42
KRT78Q8N1N4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.69■□□□□ 0.42
KRT78Q8N1N4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT78Q8N1N4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
KRT78Q8N1N4 BICD1-207ENST00000551848 1962 ntBASIC17.69■□□□□ 0.42
KRT78Q8N1N4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT78Q8N1N4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
KRT78Q8N1N4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT78Q8N1N4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
KRT78Q8N1N4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
KRT78Q8N1N4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT78Q8N1N4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
KRT78Q8N1N4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
KRT78Q8N1N4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KRT78Q8N1N4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
KRT78Q8N1N4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
KRT78Q8N1N4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
KRT78Q8N1N4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KRT78Q8N1N4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT78Q8N1N4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.68■□□□□ 0.42
KRT78Q8N1N4 AC135050.7-201ENST00000624508 2218 ntBASIC17.68■□□□□ 0.42
KRT78Q8N1N4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT78Q8N1N4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT78Q8N1N4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.68■□□□□ 0.42
KRT78Q8N1N4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.68■□□□□ 0.42
KRT78Q8N1N4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT78Q8N1N4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT78Q8N1N4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.68■□□□□ 0.42
KRT78Q8N1N4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT78Q8N1N4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT78Q8N1N4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT78Q8N1N4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KRT78Q8N1N4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.68■□□□□ 0.42
KRT78Q8N1N4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.68■□□□□ 0.42
KRT78Q8N1N4 SEC1P-202ENST00000473944 940 ntBASIC17.68■□□□□ 0.42
KRT78Q8N1N4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.68■□□□□ 0.42
KRT78Q8N1N4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.68■□□□□ 0.42
KRT78Q8N1N4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT78Q8N1N4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KRT78Q8N1N4 AC140113.3-201ENST00000605663 199 ntBASIC17.68■□□□□ 0.42
KRT78Q8N1N4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.68■□□□□ 0.42
KRT78Q8N1N4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT78Q8N1N4 AL031432.5-201ENST00000641059 760 ntBASIC17.68■□□□□ 0.42
KRT78Q8N1N4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.68■□□□□ 0.42
KRT78Q8N1N4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
KRT78Q8N1N4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT78Q8N1N4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
KRT78Q8N1N4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT78Q8N1N4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
KRT78Q8N1N4 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT78Q8N1N4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KRT78Q8N1N4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KRT78Q8N1N4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
KRT78Q8N1N4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
KRT78Q8N1N4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT78Q8N1N4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
KRT78Q8N1N4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
KRT78Q8N1N4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.67■□□□□ 0.42
KRT78Q8N1N4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
KRT78Q8N1N4 AC211429.1-201ENST00000415277 523 ntBASIC17.67■□□□□ 0.42
KRT78Q8N1N4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.67■□□□□ 0.42
KRT78Q8N1N4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.67■□□□□ 0.42
KRT78Q8N1N4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
KRT78Q8N1N4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.67■□□□□ 0.42
KRT78Q8N1N4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.67■□□□□ 0.42
KRT78Q8N1N4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KRT78Q8N1N4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT78Q8N1N4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
KRT78Q8N1N4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
KRT78Q8N1N4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KRT78Q8N1N4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT78Q8N1N4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT78Q8N1N4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KRT78Q8N1N4 NEFHP1-201ENST00000412845 2629 ntBASIC17.67■□□□□ 0.42
KRT78Q8N1N4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT78Q8N1N4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT78Q8N1N4 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
KRT78Q8N1N4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
KRT78Q8N1N4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
KRT78Q8N1N4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms