Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRRTM4Q86VH4 AL390719.2-201ENST00000606993 987 ntBASIC17.95■□□□□ 0.46
LRRTM4Q86VH4 AC093458.2-201ENST00000623150 629 ntBASIC17.95■□□□□ 0.46
LRRTM4Q86VH4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
LRRTM4Q86VH4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRTM4Q86VH4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
LRRTM4Q86VH4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRTM4Q86VH4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
LRRTM4Q86VH4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRTM4Q86VH4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
LRRTM4Q86VH4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.95■□□□□ 0.46
LRRTM4Q86VH4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
LRRTM4Q86VH4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRTM4Q86VH4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.95■□□□□ 0.46
LRRTM4Q86VH4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
LRRTM4Q86VH4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.94■□□□□ 0.46
LRRTM4Q86VH4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRTM4Q86VH4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRRTM4Q86VH4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRTM4Q86VH4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.94■□□□□ 0.46
LRRTM4Q86VH4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRRTM4Q86VH4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRTM4Q86VH4 AC138932.1-201ENST00000534164 6830 ntBASIC17.94■□□□□ 0.46
LRRTM4Q86VH4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRRTM4Q86VH4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.94■□□□□ 0.46
LRRTM4Q86VH4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRTM4Q86VH4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRTM4Q86VH4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.94■□□□□ 0.46
LRRTM4Q86VH4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRRTM4Q86VH4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
LRRTM4Q86VH4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.94■□□□□ 0.46
LRRTM4Q86VH4 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRTM4Q86VH4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
LRRTM4Q86VH4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.94■□□□□ 0.46
LRRTM4Q86VH4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.94■□□□□ 0.46
LRRTM4Q86VH4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRTM4Q86VH4 BCL2-203ENST00000589955 5011 ntBASIC17.94■□□□□ 0.46
LRRTM4Q86VH4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRTM4Q86VH4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
LRRTM4Q86VH4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.94■□□□□ 0.46
LRRTM4Q86VH4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
LRRTM4Q86VH4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRTM4Q86VH4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.94■□□□□ 0.46
LRRTM4Q86VH4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRTM4Q86VH4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.94■□□□□ 0.46
LRRTM4Q86VH4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
LRRTM4Q86VH4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRTM4Q86VH4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRTM4Q86VH4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.93■□□□□ 0.46
LRRTM4Q86VH4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRTM4Q86VH4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRTM4Q86VH4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRTM4Q86VH4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRRTM4Q86VH4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
LRRTM4Q86VH4 AL020996.1-203ENST00000536896 2307 ntBASIC17.93■□□□□ 0.46
LRRTM4Q86VH4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.93■□□□□ 0.46
LRRTM4Q86VH4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRRTM4Q86VH4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRTM4Q86VH4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRTM4Q86VH4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRTM4Q86VH4 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.93■□□□□ 0.46
LRRTM4Q86VH4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRTM4Q86VH4 AC113404.2-201ENST00000507884 177 ntBASIC17.93■□□□□ 0.46
LRRTM4Q86VH4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.93■□□□□ 0.46
LRRTM4Q86VH4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.93■□□□□ 0.46
LRRTM4Q86VH4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.93■□□□□ 0.46
LRRTM4Q86VH4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
LRRTM4Q86VH4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.93■□□□□ 0.46
LRRTM4Q86VH4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRTM4Q86VH4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRTM4Q86VH4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRTM4Q86VH4 LINC01126-201ENST00000623515 1646 ntBASIC17.93■□□□□ 0.46
LRRTM4Q86VH4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRTM4Q86VH4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRRTM4Q86VH4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.93■□□□□ 0.46
LRRTM4Q86VH4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRTM4Q86VH4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.92■□□□□ 0.46
LRRTM4Q86VH4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.92■□□□□ 0.46
LRRTM4Q86VH4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
LRRTM4Q86VH4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.92■□□□□ 0.46
LRRTM4Q86VH4 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRTM4Q86VH4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRTM4Q86VH4 AC020763.4-201ENST00000623414 4170 ntBASIC17.92■□□□□ 0.46
LRRTM4Q86VH4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRTM4Q86VH4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.92■□□□□ 0.46
LRRTM4Q86VH4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
LRRTM4Q86VH4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRTM4Q86VH4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRTM4Q86VH4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
LRRTM4Q86VH4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.92■□□□□ 0.46
LRRTM4Q86VH4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.92■□□□□ 0.46
LRRTM4Q86VH4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRTM4Q86VH4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.92■□□□□ 0.46
LRRTM4Q86VH4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.92■□□□□ 0.46
LRRTM4Q86VH4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRTM4Q86VH4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.92■□□□□ 0.46
LRRTM4Q86VH4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRTM4Q86VH4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRTM4Q86VH4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRTM4Q86VH4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms