Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.29■□□□□ 0.52
LDB1Q86U70 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LDB1Q86U70 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LDB1Q86U70 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
LDB1Q86U70 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
LDB1Q86U70 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LDB1Q86U70 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LDB1Q86U70 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
LDB1Q86U70 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LDB1Q86U70 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.29■□□□□ 0.52
LDB1Q86U70 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LDB1Q86U70 SEC1P-202ENST00000473944 940 ntBASIC18.29■□□□□ 0.52
LDB1Q86U70 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.29■□□□□ 0.52
LDB1Q86U70 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.29■□□□□ 0.52
LDB1Q86U70 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.29■□□□□ 0.52
LDB1Q86U70 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.29■□□□□ 0.52
LDB1Q86U70 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.29■□□□□ 0.52
LDB1Q86U70 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.29■□□□□ 0.52
LDB1Q86U70 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.29■□□□□ 0.52
LDB1Q86U70 AC073912.3-201ENST00000624414 853 ntBASIC18.29■□□□□ 0.52
LDB1Q86U70 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LDB1Q86U70 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LDB1Q86U70 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LDB1Q86U70 KRT8P7-201ENST00000533003 1432 ntBASIC18.29■□□□□ 0.52
LDB1Q86U70 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LDB1Q86U70 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LDB1Q86U70 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LDB1Q86U70 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
LDB1Q86U70 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
LDB1Q86U70 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LDB1Q86U70 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
LDB1Q86U70 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LDB1Q86U70 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.29■□□□□ 0.52
LDB1Q86U70 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LDB1Q86U70 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LDB1Q86U70 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.28■□□□□ 0.52
LDB1Q86U70 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LDB1Q86U70 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.28■□□□□ 0.52
LDB1Q86U70 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LDB1Q86U70 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LDB1Q86U70 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LDB1Q86U70 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
LDB1Q86U70 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LDB1Q86U70 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.28■□□□□ 0.52
LDB1Q86U70 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LDB1Q86U70 PHGDH-209ENST00000641074 1780 ntBASIC18.28■□□□□ 0.52
LDB1Q86U70 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
LDB1Q86U70 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LDB1Q86U70 MIR149-201ENST00000384879 89 ntBASIC18.28■□□□□ 0.52
LDB1Q86U70 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.28■□□□□ 0.52
LDB1Q86U70 ECEL1P3-201ENST00000427961 737 ntBASIC18.28■□□□□ 0.52
LDB1Q86U70 SLC25A3P1-201ENST00000443844 931 ntBASIC18.28■□□□□ 0.52
LDB1Q86U70 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.28■□□□□ 0.52
LDB1Q86U70 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LDB1Q86U70 AC010240.3-201ENST00000607688 395 ntBASIC18.28■□□□□ 0.52
LDB1Q86U70 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LDB1Q86U70 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
LDB1Q86U70 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LDB1Q86U70 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.28■□□□□ 0.52
LDB1Q86U70 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LDB1Q86U70 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LDB1Q86U70 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LDB1Q86U70 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.28■□□□□ 0.52
LDB1Q86U70 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LDB1Q86U70 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LDB1Q86U70 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LDB1Q86U70 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LDB1Q86U70 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
LDB1Q86U70 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
LDB1Q86U70 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LDB1Q86U70 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.27■□□□□ 0.52
LDB1Q86U70 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LDB1Q86U70 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
LDB1Q86U70 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
LDB1Q86U70 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LDB1Q86U70 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
LDB1Q86U70 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LDB1Q86U70 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.27■□□□□ 0.52
LDB1Q86U70 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LDB1Q86U70 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LDB1Q86U70 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.27■□□□□ 0.52
LDB1Q86U70 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
LDB1Q86U70 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.27■□□□□ 0.52
LDB1Q86U70 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LDB1Q86U70 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.27■□□□□ 0.52
LDB1Q86U70 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LDB1Q86U70 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.27■□□□□ 0.52
LDB1Q86U70 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.27■□□□□ 0.52
LDB1Q86U70 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.27■□□□□ 0.52
LDB1Q86U70 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.27■□□□□ 0.52
LDB1Q86U70 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
LDB1Q86U70 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
LDB1Q86U70 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
LDB1Q86U70 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
LDB1Q86U70 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.27■□□□□ 0.51
LDB1Q86U70 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.27■□□□□ 0.51
LDB1Q86U70 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LDB1Q86U70 LINC01126-201ENST00000623515 1646 ntBASIC18.27■□□□□ 0.51
LDB1Q86U70 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LDB1Q86U70 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms