Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC24.69■■□□□ 1.54
KRT28Q7Z3Y7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
KRT28Q7Z3Y7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
KRT28Q7Z3Y7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC24.69■■□□□ 1.54
KRT28Q7Z3Y7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
KRT28Q7Z3Y7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
KRT28Q7Z3Y7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
KRT28Q7Z3Y7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC24.68■■□□□ 1.54
KRT28Q7Z3Y7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC24.68■■□□□ 1.54
KRT28Q7Z3Y7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
KRT28Q7Z3Y7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC24.68■■□□□ 1.54
KRT28Q7Z3Y7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
KRT28Q7Z3Y7 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
KRT28Q7Z3Y7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC24.68■■□□□ 1.54
KRT28Q7Z3Y7 AC211486.1-202ENST00000416371 468 ntBASIC24.68■■□□□ 1.54
KRT28Q7Z3Y7 LAGE3P1-201ENST00000425356 484 ntBASIC24.68■■□□□ 1.54
KRT28Q7Z3Y7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC24.68■■□□□ 1.54
KRT28Q7Z3Y7 AC211476.1-201ENST00000503899 468 ntBASIC24.68■■□□□ 1.54
KRT28Q7Z3Y7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
KRT28Q7Z3Y7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
KRT28Q7Z3Y7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
KRT28Q7Z3Y7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC24.68■■□□□ 1.54
KRT28Q7Z3Y7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
KRT28Q7Z3Y7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC24.68■■□□□ 1.54
KRT28Q7Z3Y7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
KRT28Q7Z3Y7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
KRT28Q7Z3Y7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC24.67■■□□□ 1.54
KRT28Q7Z3Y7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
KRT28Q7Z3Y7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
KRT28Q7Z3Y7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
KRT28Q7Z3Y7 KRT18P28-201ENST00000453838 1332 ntBASIC24.67■■□□□ 1.54
KRT28Q7Z3Y7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
KRT28Q7Z3Y7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC24.67■■□□□ 1.54
KRT28Q7Z3Y7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
KRT28Q7Z3Y7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC24.67■■□□□ 1.54
KRT28Q7Z3Y7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC24.67■■□□□ 1.54
KRT28Q7Z3Y7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC24.67■■□□□ 1.54
KRT28Q7Z3Y7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC24.67■■□□□ 1.54
KRT28Q7Z3Y7 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC24.67■■□□□ 1.54
KRT28Q7Z3Y7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
KRT28Q7Z3Y7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
KRT28Q7Z3Y7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
KRT28Q7Z3Y7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
KRT28Q7Z3Y7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
KRT28Q7Z3Y7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC24.67■■□□□ 1.54
KRT28Q7Z3Y7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
KRT28Q7Z3Y7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
KRT28Q7Z3Y7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
KRT28Q7Z3Y7 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
KRT28Q7Z3Y7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
KRT28Q7Z3Y7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC24.66■■□□□ 1.54
KRT28Q7Z3Y7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
KRT28Q7Z3Y7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
KRT28Q7Z3Y7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
KRT28Q7Z3Y7 KRT18P65-201ENST00000439811 1286 ntBASIC24.66■■□□□ 1.54
KRT28Q7Z3Y7 AP006288.1-201ENST00000446065 395 ntBASIC24.66■■□□□ 1.54
KRT28Q7Z3Y7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC24.66■■□□□ 1.54
KRT28Q7Z3Y7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
KRT28Q7Z3Y7 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
KRT28Q7Z3Y7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC24.66■■□□□ 1.54
KRT28Q7Z3Y7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC24.66■■□□□ 1.54
KRT28Q7Z3Y7 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC24.66■■□□□ 1.54
KRT28Q7Z3Y7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
KRT28Q7Z3Y7 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC24.66■■□□□ 1.54
KRT28Q7Z3Y7 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
KRT28Q7Z3Y7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
KRT28Q7Z3Y7 MYLKP1-201ENST00000509077 1580 ntBASIC24.66■■□□□ 1.54
KRT28Q7Z3Y7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
KRT28Q7Z3Y7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
KRT28Q7Z3Y7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
KRT28Q7Z3Y7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
KRT28Q7Z3Y7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC24.65■■□□□ 1.54
KRT28Q7Z3Y7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC24.65■■□□□ 1.54
KRT28Q7Z3Y7 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
KRT28Q7Z3Y7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC24.65■■□□□ 1.54
KRT28Q7Z3Y7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
KRT28Q7Z3Y7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC24.65■■□□□ 1.54
KRT28Q7Z3Y7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC24.65■■□□□ 1.54
KRT28Q7Z3Y7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
KRT28Q7Z3Y7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC24.65■■□□□ 1.54
KRT28Q7Z3Y7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
KRT28Q7Z3Y7 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
KRT28Q7Z3Y7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
KRT28Q7Z3Y7 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC24.65■■□□□ 1.54
KRT28Q7Z3Y7 AL596442.2-201ENST00000610240 980 ntBASIC24.65■■□□□ 1.54
KRT28Q7Z3Y7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC24.65■■□□□ 1.54
KRT28Q7Z3Y7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC24.65■■□□□ 1.54
KRT28Q7Z3Y7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
KRT28Q7Z3Y7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
KRT28Q7Z3Y7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
KRT28Q7Z3Y7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
KRT28Q7Z3Y7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC24.65■■□□□ 1.54
KRT28Q7Z3Y7 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
KRT28Q7Z3Y7 LINC01126-201ENST00000623515 1646 ntBASIC24.64■■□□□ 1.54
KRT28Q7Z3Y7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC24.64■■□□□ 1.54
KRT28Q7Z3Y7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
KRT28Q7Z3Y7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
KRT28Q7Z3Y7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC24.64■■□□□ 1.54
KRT28Q7Z3Y7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC24.64■■□□□ 1.54
KRT28Q7Z3Y7 AL158211.5-201ENST00000623583 2518 ntBASIC24.64■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms